Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3854A0A1B0GSS6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3854A0A1B0GSS6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3854A0A1B0GSS6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3854A0A1B0GSS6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3854A0A1B0GSS6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3854A0A1B0GSS6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3854A0A1B0GSS6 Gm10493-201ENSMUST00000097270 612 ntBASIC20.43■□□□□ 0.86
Gm3854A0A1B0GSS6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Gm3854A0A1B0GSS6 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3854A0A1B0GSS6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3854A0A1B0GSS6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.43■□□□□ 0.86
Gm3854A0A1B0GSS6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3854A0A1B0GSS6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3854A0A1B0GSS6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3854A0A1B0GSS6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3854A0A1B0GSS6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3854A0A1B0GSS6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.42■□□□□ 0.86
Gm3854A0A1B0GSS6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
Gm3854A0A1B0GSS6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.42■□□□□ 0.86
Gm3854A0A1B0GSS6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3854A0A1B0GSS6 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
Gm3854A0A1B0GSS6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3854A0A1B0GSS6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Gm3854A0A1B0GSS6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3854A0A1B0GSS6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3854A0A1B0GSS6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3854A0A1B0GSS6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3854A0A1B0GSS6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3854A0A1B0GSS6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.41■□□□□ 0.86
Gm3854A0A1B0GSS6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3854A0A1B0GSS6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm3854A0A1B0GSS6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm3854A0A1B0GSS6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm3854A0A1B0GSS6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm3854A0A1B0GSS6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.4■□□□□ 0.86
Gm3854A0A1B0GSS6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.4■□□□□ 0.86
Gm3854A0A1B0GSS6 Gm7291-201ENSMUST00000199147 382 ntBASIC20.4■□□□□ 0.86
Gm3854A0A1B0GSS6 Gm42569-201ENSMUST00000200539 472 ntBASIC20.4■□□□□ 0.86
Gm3854A0A1B0GSS6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.4■□□□□ 0.86
Gm3854A0A1B0GSS6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm3854A0A1B0GSS6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Gm3854A0A1B0GSS6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm3854A0A1B0GSS6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Gm3854A0A1B0GSS6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.39■□□□□ 0.85
Gm3854A0A1B0GSS6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.39■□□□□ 0.85
Gm3854A0A1B0GSS6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm3854A0A1B0GSS6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gm3854A0A1B0GSS6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Gm3854A0A1B0GSS6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gm3854A0A1B0GSS6 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Gm3854A0A1B0GSS6 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3854A0A1B0GSS6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Gm3854A0A1B0GSS6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3854A0A1B0GSS6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3854A0A1B0GSS6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3854A0A1B0GSS6 Smad6-203ENSMUST00000179458 273 ntBASIC20.38■□□□□ 0.85
Gm3854A0A1B0GSS6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3854A0A1B0GSS6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3854A0A1B0GSS6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3854A0A1B0GSS6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Gm3854A0A1B0GSS6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm3854A0A1B0GSS6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Gm3854A0A1B0GSS6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Gm3854A0A1B0GSS6 Gm26571-201ENSMUST00000181399 666 ntBASIC20.37■□□□□ 0.85
Gm3854A0A1B0GSS6 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.37■□□□□ 0.85
Gm3854A0A1B0GSS6 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.37■□□□□ 0.85
Gm3854A0A1B0GSS6 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.37■□□□□ 0.85
Gm3854A0A1B0GSS6 Gm42642-201ENSMUST00000200683 355 ntBASIC20.37■□□□□ 0.85
Gm3854A0A1B0GSS6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm3854A0A1B0GSS6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Gm3854A0A1B0GSS6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm3854A0A1B0GSS6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Gm3854A0A1B0GSS6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3854A0A1B0GSS6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3854A0A1B0GSS6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3854A0A1B0GSS6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.36■□□□□ 0.85
Gm3854A0A1B0GSS6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3854A0A1B0GSS6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Gm3854A0A1B0GSS6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3854A0A1B0GSS6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3854A0A1B0GSS6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3854A0A1B0GSS6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3854A0A1B0GSS6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3854A0A1B0GSS6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3854A0A1B0GSS6 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.35■□□□□ 0.85
Gm3854A0A1B0GSS6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.35■□□□□ 0.85
Gm3854A0A1B0GSS6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3854A0A1B0GSS6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.35■□□□□ 0.85
Gm3854A0A1B0GSS6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3854A0A1B0GSS6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3854A0A1B0GSS6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3854A0A1B0GSS6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3854A0A1B0GSS6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3854A0A1B0GSS6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.34■□□□□ 0.85
Gm3854A0A1B0GSS6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.34■□□□□ 0.85
Gm3854A0A1B0GSS6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.34■□□□□ 0.85
Gm3854A0A1B0GSS6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.34■□□□□ 0.85
Gm3854A0A1B0GSS6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3854A0A1B0GSS6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms