Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Gm12818-201ENSMUST00000117562 1349 ntBASIC14.86□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Trdv2-1A0A0G2JGB9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC14.85□□□□□ -0.03
Trdv2-1A0A0G2JGB9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC14.85□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC14.85□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-1A0A0G2JGB9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-1A0A0G2JGB9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trdv2-1A0A0G2JGB9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trdv2-1A0A0G2JGB9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdv2-1A0A0G2JGB9 AC154454.1-201ENSMUST00000225253 216 ntBASIC14.83□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.82□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdv2-1A0A0G2JGB9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC14.82□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.82□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trdv2-1A0A0G2JGB9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.81□□□□□ -0.04
Trdv2-1A0A0G2JGB9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC14.81□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC14.81□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.81□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.8□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.8□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC14.8□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC14.8□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trdv2-1A0A0G2JGB9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms