Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13n-4A0A0G2JG01 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13n-4A0A0G2JG01 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13n-4A0A0G2JG01 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13n-4A0A0G2JG01 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13n-4A0A0G2JG01 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav13n-4A0A0G2JG01 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13n-4A0A0G2JG01 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13n-4A0A0G2JG01 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13n-4A0A0G2JG01 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13n-4A0A0G2JG01 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13n-4A0A0G2JG01 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13n-4A0A0G2JG01 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13n-4A0A0G2JG01 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13n-4A0A0G2JG01 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13n-4A0A0G2JG01 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13n-4A0A0G2JG01 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13n-4A0A0G2JG01 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.36■□□□□ 0.21
Trav13n-4A0A0G2JG01 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav13n-4A0A0G2JG01 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.36■□□□□ 0.21
Trav13n-4A0A0G2JG01 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13n-4A0A0G2JG01 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trav13n-4A0A0G2JG01 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav13n-4A0A0G2JG01 Gm10399-202ENSMUST00000202768 748 ntBASIC16.36■□□□□ 0.21
Trav13n-4A0A0G2JG01 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.36■□□□□ 0.21
Trav13n-4A0A0G2JG01 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.36■□□□□ 0.21
Trav13n-4A0A0G2JG01 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13n-4A0A0G2JG01 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trav13n-4A0A0G2JG01 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13n-4A0A0G2JG01 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13n-4A0A0G2JG01 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trav13n-4A0A0G2JG01 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13n-4A0A0G2JG01 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13n-4A0A0G2JG01 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13n-4A0A0G2JG01 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav13n-4A0A0G2JG01 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13n-4A0A0G2JG01 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trav13n-4A0A0G2JG01 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13n-4A0A0G2JG01 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13n-4A0A0G2JG01 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13n-4A0A0G2JG01 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13n-4A0A0G2JG01 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13n-4A0A0G2JG01 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13n-4A0A0G2JG01 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13n-4A0A0G2JG01 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trav13n-4A0A0G2JG01 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trav13n-4A0A0G2JG01 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trav13n-4A0A0G2JG01 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.34■□□□□ 0.21
Trav13n-4A0A0G2JG01 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13n-4A0A0G2JG01 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13n-4A0A0G2JG01 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13n-4A0A0G2JG01 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13n-4A0A0G2JG01 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.34■□□□□ 0.21
Trav13n-4A0A0G2JG01 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav13n-4A0A0G2JG01 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav13n-4A0A0G2JG01 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13n-4A0A0G2JG01 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13n-4A0A0G2JG01 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13n-4A0A0G2JG01 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13n-4A0A0G2JG01 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13n-4A0A0G2JG01 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13n-4A0A0G2JG01 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13n-4A0A0G2JG01 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13n-4A0A0G2JG01 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trav13n-4A0A0G2JG01 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13n-4A0A0G2JG01 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav13n-4A0A0G2JG01 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav13n-4A0A0G2JG01 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav13n-4A0A0G2JG01 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav13n-4A0A0G2JG01 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.32■□□□□ 0.2
Trav13n-4A0A0G2JG01 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav13n-4A0A0G2JG01 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav13n-4A0A0G2JG01 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav13n-4A0A0G2JG01 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav13n-4A0A0G2JG01 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13n-4A0A0G2JG01 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13n-4A0A0G2JG01 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13n-4A0A0G2JG01 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav13n-4A0A0G2JG01 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.31■□□□□ 0.2
Trav13n-4A0A0G2JG01 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav13n-4A0A0G2JG01 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13n-4A0A0G2JG01 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13n-4A0A0G2JG01 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.31■□□□□ 0.2
Trav13n-4A0A0G2JG01 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.31■□□□□ 0.2
Trav13n-4A0A0G2JG01 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13n-4A0A0G2JG01 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13n-4A0A0G2JG01 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13n-4A0A0G2JG01 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav13n-4A0A0G2JG01 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav13n-4A0A0G2JG01 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav13n-4A0A0G2JG01 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.3■□□□□ 0.2
Trav13n-4A0A0G2JG01 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav13n-4A0A0G2JG01 Gm21956-201ENSMUST00000179946 522 ntBASIC16.3■□□□□ 0.2
Trav13n-4A0A0G2JG01 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav13n-4A0A0G2JG01 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.3■□□□□ 0.2
Trav13n-4A0A0G2JG01 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav13n-4A0A0G2JG01 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13n-4A0A0G2JG01 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13n-4A0A0G2JG01 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13n-4A0A0G2JG01 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms