Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.21■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.21■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC15.21■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC15.21■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.21■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.2■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.19■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.19■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.18■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.18■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC15.17■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.17■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.16■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Gm24970-201ENSMUST00000175582 82 ntBASIC15.16■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.15■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tcrg-V4A0A0B4J1J8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms