Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh7A0A0A6YY83 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Pcdh7A0A0A6YY83 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh7A0A0A6YY83 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh7A0A0A6YY83 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh7A0A0A6YY83 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh7A0A0A6YY83 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh7A0A0A6YY83 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh7A0A0A6YY83 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdh7A0A0A6YY83 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh7A0A0A6YY83 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh7A0A0A6YY83 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh7A0A0A6YY83 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.99■□□□□ 0.95
Pcdh7A0A0A6YY83 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh7A0A0A6YY83 Gm43530-201ENSMUST00000195920 274 ntBASIC20.99■□□□□ 0.95
Pcdh7A0A0A6YY83 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh7A0A0A6YY83 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh7A0A0A6YY83 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh7A0A0A6YY83 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh7A0A0A6YY83 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh7A0A0A6YY83 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh7A0A0A6YY83 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Pcdh7A0A0A6YY83 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh7A0A0A6YY83 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh7A0A0A6YY83 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh7A0A0A6YY83 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Pcdh7A0A0A6YY83 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.98■□□□□ 0.95
Pcdh7A0A0A6YY83 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh7A0A0A6YY83 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.98■□□□□ 0.95
Pcdh7A0A0A6YY83 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh7A0A0A6YY83 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh7A0A0A6YY83 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh7A0A0A6YY83 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh7A0A0A6YY83 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh7A0A0A6YY83 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh7A0A0A6YY83 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh7A0A0A6YY83 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh7A0A0A6YY83 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Pcdh7A0A0A6YY83 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh7A0A0A6YY83 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh7A0A0A6YY83 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh7A0A0A6YY83 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh7A0A0A6YY83 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Pcdh7A0A0A6YY83 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh7A0A0A6YY83 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh7A0A0A6YY83 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh7A0A0A6YY83 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.96■□□□□ 0.95
Pcdh7A0A0A6YY83 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Pcdh7A0A0A6YY83 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh7A0A0A6YY83 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh7A0A0A6YY83 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.96■□□□□ 0.95
Pcdh7A0A0A6YY83 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh7A0A0A6YY83 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh7A0A0A6YY83 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh7A0A0A6YY83 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh7A0A0A6YY83 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Pcdh7A0A0A6YY83 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.95■□□□□ 0.95
Pcdh7A0A0A6YY83 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh7A0A0A6YY83 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh7A0A0A6YY83 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Pcdh7A0A0A6YY83 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh7A0A0A6YY83 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.95■□□□□ 0.94
Pcdh7A0A0A6YY83 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.95■□□□□ 0.94
Pcdh7A0A0A6YY83 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh7A0A0A6YY83 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh7A0A0A6YY83 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Pcdh7A0A0A6YY83 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Pcdh7A0A0A6YY83 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.95■□□□□ 0.94
Pcdh7A0A0A6YY83 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh7A0A0A6YY83 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh7A0A0A6YY83 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh7A0A0A6YY83 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh7A0A0A6YY83 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh7A0A0A6YY83 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh7A0A0A6YY83 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh7A0A0A6YY83 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh7A0A0A6YY83 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh7A0A0A6YY83 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
Pcdh7A0A0A6YY83 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh7A0A0A6YY83 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh7A0A0A6YY83 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.94■□□□□ 0.94
Pcdh7A0A0A6YY83 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh7A0A0A6YY83 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh7A0A0A6YY83 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh7A0A0A6YY83 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh7A0A0A6YY83 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pcdh7A0A0A6YY83 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh7A0A0A6YY83 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.93■□□□□ 0.94
Pcdh7A0A0A6YY83 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Pcdh7A0A0A6YY83 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh7A0A0A6YY83 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh7A0A0A6YY83 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh7A0A0A6YY83 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh7A0A0A6YY83 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Pcdh7A0A0A6YY83 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.92■□□□□ 0.94
Pcdh7A0A0A6YY83 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.92■□□□□ 0.94
Pcdh7A0A0A6YY83 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh7A0A0A6YY83 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh7A0A0A6YY83 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.92■□□□□ 0.94
Pcdh7A0A0A6YY83 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms