Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Gm9870-201ENSMUST00000063874 645 ntBASIC15.63■□□□□ 0.09
Trav6-4A0A075B6B4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-4A0A075B6B4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-4A0A075B6B4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-4A0A075B6B4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-4A0A075B6B4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-4A0A075B6B4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-4A0A075B6B4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-4A0A075B6B4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-4A0A075B6B4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.62■□□□□ 0.09
Trav6-4A0A075B6B4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav6-4A0A075B6B4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-4A0A075B6B4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-4A0A075B6B4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.62■□□□□ 0.09
Trav6-4A0A075B6B4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav6-4A0A075B6B4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-4A0A075B6B4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-4A0A075B6B4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-4A0A075B6B4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-4A0A075B6B4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-4A0A075B6B4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-4A0A075B6B4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-4A0A075B6B4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-4A0A075B6B4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
Trav6-4A0A075B6B4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-4A0A075B6B4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-4A0A075B6B4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav6-4A0A075B6B4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-4A0A075B6B4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-4A0A075B6B4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav6-4A0A075B6B4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav6-4A0A075B6B4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav6-4A0A075B6B4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-4A0A075B6B4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.61■□□□□ 0.09
Trav6-4A0A075B6B4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-4A0A075B6B4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-4A0A075B6B4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-4A0A075B6B4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-4A0A075B6B4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-4A0A075B6B4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.6■□□□□ 0.09
Trav6-4A0A075B6B4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.6■□□□□ 0.09
Trav6-4A0A075B6B4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-4A0A075B6B4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-4A0A075B6B4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-4A0A075B6B4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-4A0A075B6B4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-4A0A075B6B4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-4A0A075B6B4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav6-4A0A075B6B4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-4A0A075B6B4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-4A0A075B6B4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-4A0A075B6B4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-4A0A075B6B4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-4A0A075B6B4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-4A0A075B6B4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav6-4A0A075B6B4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-4A0A075B6B4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-4A0A075B6B4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav6-4A0A075B6B4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav6-4A0A075B6B4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.09
Trav6-4A0A075B6B4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav6-4A0A075B6B4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-4A0A075B6B4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-4A0A075B6B4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav6-4A0A075B6B4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.58■□□□□ 0.08
Trav6-4A0A075B6B4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-4A0A075B6B4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Trav6-4A0A075B6B4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-4A0A075B6B4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trav6-4A0A075B6B4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-4A0A075B6B4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trav6-4A0A075B6B4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-4A0A075B6B4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-4A0A075B6B4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.57■□□□□ 0.08
Trav6-4A0A075B6B4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Trav6-4A0A075B6B4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav6-4A0A075B6B4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-4A0A075B6B4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-4A0A075B6B4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-4A0A075B6B4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
Trav6-4A0A075B6B4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.57■□□□□ 0.08
Trav6-4A0A075B6B4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-4A0A075B6B4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-4A0A075B6B4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-4A0A075B6B4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-4A0A075B6B4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav6-4A0A075B6B4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Trav6-4A0A075B6B4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav6-4A0A075B6B4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-4A0A075B6B4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.56■□□□□ 0.08
Trav6-4A0A075B6B4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav6-4A0A075B6B4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.56■□□□□ 0.08
Trav6-4A0A075B6B4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-4A0A075B6B4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-4A0A075B6B4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Trav6-4A0A075B6B4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-4A0A075B6B4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-4A0A075B6B4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-4A0A075B6B4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-4A0A075B6B4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms