Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6n-6A0A075B6B2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC15.03■□□□□ -0
Trav6n-6A0A075B6B2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6n-6A0A075B6B2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav6n-6A0A075B6B2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC15.03■□□□□ -0
Trav6n-6A0A075B6B2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav6n-6A0A075B6B2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav6n-6A0A075B6B2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6n-6A0A075B6B2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6n-6A0A075B6B2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6n-6A0A075B6B2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trav6n-6A0A075B6B2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6n-6A0A075B6B2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trav6n-6A0A075B6B2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6n-6A0A075B6B2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav6n-6A0A075B6B2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.02■□□□□ -0
Trav6n-6A0A075B6B2 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.02□□□□□ -0.01
Trav6n-6A0A075B6B2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Trav6n-6A0A075B6B2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Trav6n-6A0A075B6B2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Trav6n-6A0A075B6B2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6n-6A0A075B6B2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6n-6A0A075B6B2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Trav6n-6A0A075B6B2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6n-6A0A075B6B2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6n-6A0A075B6B2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6n-6A0A075B6B2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6n-6A0A075B6B2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6n-6A0A075B6B2 Gm5921-201ENSMUST00000075898 882 ntBASIC15.01□□□□□ -0.01
Trav6n-6A0A075B6B2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6n-6A0A075B6B2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6n-6A0A075B6B2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6n-6A0A075B6B2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6n-6A0A075B6B2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6n-6A0A075B6B2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC15□□□□□ -0.01
Trav6n-6A0A075B6B2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6n-6A0A075B6B2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6n-6A0A075B6B2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC15□□□□□ -0.01
Trav6n-6A0A075B6B2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6n-6A0A075B6B2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav6n-6A0A075B6B2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6n-6A0A075B6B2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC15□□□□□ -0.01
Trav6n-6A0A075B6B2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Trav6n-6A0A075B6B2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav6n-6A0A075B6B2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6n-6A0A075B6B2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav6n-6A0A075B6B2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6n-6A0A075B6B2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6n-6A0A075B6B2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6n-6A0A075B6B2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15□□□□□ -0.01
Trav6n-6A0A075B6B2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Trav6n-6A0A075B6B2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Trav6n-6A0A075B6B2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6n-6A0A075B6B2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6n-6A0A075B6B2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav6n-6A0A075B6B2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6n-6A0A075B6B2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6n-6A0A075B6B2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6n-6A0A075B6B2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6n-6A0A075B6B2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC14.99□□□□□ -0.01
Trav6n-6A0A075B6B2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6n-6A0A075B6B2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6n-6A0A075B6B2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6n-6A0A075B6B2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6n-6A0A075B6B2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav6n-6A0A075B6B2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6n-6A0A075B6B2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC14.99□□□□□ -0.01
Trav6n-6A0A075B6B2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6n-6A0A075B6B2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6n-6A0A075B6B2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trav6n-6A0A075B6B2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6n-6A0A075B6B2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6n-6A0A075B6B2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav6n-6A0A075B6B2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav6n-6A0A075B6B2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6n-6A0A075B6B2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6n-6A0A075B6B2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6n-6A0A075B6B2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6n-6A0A075B6B2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav6n-6A0A075B6B2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav6n-6A0A075B6B2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6n-6A0A075B6B2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6n-6A0A075B6B2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6n-6A0A075B6B2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6n-6A0A075B6B2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav6n-6A0A075B6B2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6n-6A0A075B6B2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6n-6A0A075B6B2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav6n-6A0A075B6B2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6n-6A0A075B6B2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6n-6A0A075B6B2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6n-6A0A075B6B2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6n-6A0A075B6B2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6n-6A0A075B6B2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6n-6A0A075B6B2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav6n-6A0A075B6B2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav6n-6A0A075B6B2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6n-6A0A075B6B2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6n-6A0A075B6B2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6n-6A0A075B6B2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms