Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6n-7A0A075B6A6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6n-7A0A075B6A6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav6n-7A0A075B6A6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav6n-7A0A075B6A6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trav6n-7A0A075B6A6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trav6n-7A0A075B6A6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6n-7A0A075B6A6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6n-7A0A075B6A6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav6n-7A0A075B6A6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6n-7A0A075B6A6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.26■□□□□ 0.35
Trav6n-7A0A075B6A6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6n-7A0A075B6A6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6n-7A0A075B6A6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Trav6n-7A0A075B6A6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6n-7A0A075B6A6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6n-7A0A075B6A6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
Trav6n-7A0A075B6A6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6n-7A0A075B6A6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6n-7A0A075B6A6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6n-7A0A075B6A6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trav6n-7A0A075B6A6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav6n-7A0A075B6A6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav6n-7A0A075B6A6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6n-7A0A075B6A6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trav6n-7A0A075B6A6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.24■□□□□ 0.35
Trav6n-7A0A075B6A6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav6n-7A0A075B6A6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6n-7A0A075B6A6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6n-7A0A075B6A6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6n-7A0A075B6A6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6n-7A0A075B6A6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6n-7A0A075B6A6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6n-7A0A075B6A6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6n-7A0A075B6A6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6n-7A0A075B6A6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6n-7A0A075B6A6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trav6n-7A0A075B6A6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Trav6n-7A0A075B6A6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6n-7A0A075B6A6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Trav6n-7A0A075B6A6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
Trav6n-7A0A075B6A6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6n-7A0A075B6A6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6n-7A0A075B6A6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trav6n-7A0A075B6A6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6n-7A0A075B6A6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6n-7A0A075B6A6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.22■□□□□ 0.35
Trav6n-7A0A075B6A6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trav6n-7A0A075B6A6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6n-7A0A075B6A6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6n-7A0A075B6A6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6n-7A0A075B6A6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6n-7A0A075B6A6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6n-7A0A075B6A6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6n-7A0A075B6A6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6n-7A0A075B6A6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.21■□□□□ 0.35
Trav6n-7A0A075B6A6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6n-7A0A075B6A6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6n-7A0A075B6A6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6n-7A0A075B6A6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trav6n-7A0A075B6A6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.21■□□□□ 0.34
Trav6n-7A0A075B6A6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trav6n-7A0A075B6A6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6n-7A0A075B6A6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6n-7A0A075B6A6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6n-7A0A075B6A6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6n-7A0A075B6A6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.2■□□□□ 0.34
Trav6n-7A0A075B6A6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.2■□□□□ 0.34
Trav6n-7A0A075B6A6 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.2■□□□□ 0.34
Trav6n-7A0A075B6A6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
Trav6n-7A0A075B6A6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6n-7A0A075B6A6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6n-7A0A075B6A6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6n-7A0A075B6A6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6n-7A0A075B6A6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trav6n-7A0A075B6A6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6n-7A0A075B6A6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6n-7A0A075B6A6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.19■□□□□ 0.34
Trav6n-7A0A075B6A6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6n-7A0A075B6A6 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.19■□□□□ 0.34
Trav6n-7A0A075B6A6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.19■□□□□ 0.34
Trav6n-7A0A075B6A6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6n-7A0A075B6A6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.19■□□□□ 0.34
Trav6n-7A0A075B6A6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6n-7A0A075B6A6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6n-7A0A075B6A6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6n-7A0A075B6A6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6n-7A0A075B6A6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6n-7A0A075B6A6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6n-7A0A075B6A6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6n-7A0A075B6A6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6n-7A0A075B6A6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6n-7A0A075B6A6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6n-7A0A075B6A6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6n-7A0A075B6A6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6n-7A0A075B6A6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6n-7A0A075B6A6 Gm12922-201ENSMUST00000120626 809 ntBASIC17.17■□□□□ 0.34
Trav6n-7A0A075B6A6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6n-7A0A075B6A6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6n-7A0A075B6A6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms