Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12d-3A0A075B6A4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Trav12d-3A0A075B6A4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12d-3A0A075B6A4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12d-3A0A075B6A4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12d-3A0A075B6A4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12d-3A0A075B6A4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12d-3A0A075B6A4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12d-3A0A075B6A4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav12d-3A0A075B6A4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav12d-3A0A075B6A4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12d-3A0A075B6A4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12d-3A0A075B6A4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12d-3A0A075B6A4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC15.19■□□□□ 0.02
Trav12d-3A0A075B6A4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12d-3A0A075B6A4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-3A0A075B6A4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav12d-3A0A075B6A4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-3A0A075B6A4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-3A0A075B6A4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-3A0A075B6A4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC15.18■□□□□ 0.02
Trav12d-3A0A075B6A4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-3A0A075B6A4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav12d-3A0A075B6A4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-3A0A075B6A4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-3A0A075B6A4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Trav12d-3A0A075B6A4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-3A0A075B6A4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12d-3A0A075B6A4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav12d-3A0A075B6A4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-3A0A075B6A4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Trav12d-3A0A075B6A4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-3A0A075B6A4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-3A0A075B6A4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-3A0A075B6A4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-3A0A075B6A4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-3A0A075B6A4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav12d-3A0A075B6A4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav12d-3A0A075B6A4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav12d-3A0A075B6A4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Trav12d-3A0A075B6A4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-3A0A075B6A4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-3A0A075B6A4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12d-3A0A075B6A4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12d-3A0A075B6A4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12d-3A0A075B6A4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12d-3A0A075B6A4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12d-3A0A075B6A4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12d-3A0A075B6A4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12d-3A0A075B6A4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12d-3A0A075B6A4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12d-3A0A075B6A4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav12d-3A0A075B6A4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Trav12d-3A0A075B6A4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav12d-3A0A075B6A4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav12d-3A0A075B6A4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12d-3A0A075B6A4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12d-3A0A075B6A4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12d-3A0A075B6A4 Rarb-207ENSMUST00000225921 2756 ntBASIC15.15■□□□□ 0.02
Trav12d-3A0A075B6A4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Trav12d-3A0A075B6A4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12d-3A0A075B6A4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12d-3A0A075B6A4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trav12d-3A0A075B6A4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12d-3A0A075B6A4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12d-3A0A075B6A4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12d-3A0A075B6A4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC15.14■□□□□ 0.01
Trav12d-3A0A075B6A4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12d-3A0A075B6A4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12d-3A0A075B6A4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12d-3A0A075B6A4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Trav12d-3A0A075B6A4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12d-3A0A075B6A4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12d-3A0A075B6A4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12d-3A0A075B6A4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav12d-3A0A075B6A4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12d-3A0A075B6A4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav12d-3A0A075B6A4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12d-3A0A075B6A4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12d-3A0A075B6A4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12d-3A0A075B6A4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12d-3A0A075B6A4 Gm4799-201ENSMUST00000095396 657 ntBASIC15.13■□□□□ 0.01
Trav12d-3A0A075B6A4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12d-3A0A075B6A4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Trav12d-3A0A075B6A4 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.13■□□□□ 0.01
Trav12d-3A0A075B6A4 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12d-3A0A075B6A4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12d-3A0A075B6A4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12d-3A0A075B6A4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12d-3A0A075B6A4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav12d-3A0A075B6A4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12d-3A0A075B6A4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12d-3A0A075B6A4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav12d-3A0A075B6A4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12d-3A0A075B6A4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Trav12d-3A0A075B6A4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12d-3A0A075B6A4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12d-3A0A075B6A4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12d-3A0A075B6A4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav12d-3A0A075B6A4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms