Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trav12-3A0A075B648 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-3A0A075B648 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-3A0A075B648 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-3A0A075B648 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Trav12-3A0A075B648 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trav12-3A0A075B648 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav12-3A0A075B648 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav12-3A0A075B648 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-3A0A075B648 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav12-3A0A075B648 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-3A0A075B648 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-3A0A075B648 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-3A0A075B648 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-3A0A075B648 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-3A0A075B648 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-3A0A075B648 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-3A0A075B648 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav12-3A0A075B648 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-3A0A075B648 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.84□□□□□ -0.03
Trav12-3A0A075B648 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav12-3A0A075B648 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav12-3A0A075B648 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-3A0A075B648 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav12-3A0A075B648 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-3A0A075B648 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-3A0A075B648 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-3A0A075B648 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-3A0A075B648 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.84□□□□□ -0.03
Trav12-3A0A075B648 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav12-3A0A075B648 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav12-3A0A075B648 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav12-3A0A075B648 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav12-3A0A075B648 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav12-3A0A075B648 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC14.83□□□□□ -0.04
Trav12-3A0A075B648 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav12-3A0A075B648 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav12-3A0A075B648 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav12-3A0A075B648 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.83□□□□□ -0.04
Trav12-3A0A075B648 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12-3A0A075B648 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12-3A0A075B648 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC14.82□□□□□ -0.04
Trav12-3A0A075B648 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12-3A0A075B648 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12-3A0A075B648 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12-3A0A075B648 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12-3A0A075B648 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12-3A0A075B648 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12-3A0A075B648 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Trav12-3A0A075B648 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12-3A0A075B648 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12-3A0A075B648 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12-3A0A075B648 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-3A0A075B648 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-3A0A075B648 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-3A0A075B648 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav12-3A0A075B648 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-3A0A075B648 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-3A0A075B648 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-3A0A075B648 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-3A0A075B648 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-3A0A075B648 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-3A0A075B648 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-3A0A075B648 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-3A0A075B648 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-3A0A075B648 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-3A0A075B648 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-3A0A075B648 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-3A0A075B648 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-3A0A075B648 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-3A0A075B648 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-3A0A075B648 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-3A0A075B648 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
Trav12-3A0A075B648 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-3A0A075B648 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-3A0A075B648 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-3A0A075B648 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.8□□□□□ -0.04
Trav12-3A0A075B648 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-3A0A075B648 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav12-3A0A075B648 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12-3A0A075B648 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Trav12-3A0A075B648 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav12-3A0A075B648 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.79□□□□□ -0.04
Trav12-3A0A075B648 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12-3A0A075B648 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12-3A0A075B648 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12-3A0A075B648 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav12-3A0A075B648 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav12-3A0A075B648 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12-3A0A075B648 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-3A0A075B648 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-3A0A075B648 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Trav12-3A0A075B648 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-3A0A075B648 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Trav12-3A0A075B648 Gm24970-201ENSMUST00000175582 82 ntBASIC14.78□□□□□ -0.04
Trav12-3A0A075B648 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-3A0A075B648 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-3A0A075B648 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-3A0A075B648 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-3A0A075B648 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms