Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC13.82□□□□□ -0.2
Trav4d-3A0A075B625 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav4d-3A0A075B625 Gm45855-201ENSMUST00000212546 880 ntBASIC13.82□□□□□ -0.2
Trav4d-3A0A075B625 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trav4d-3A0A075B625 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav4d-3A0A075B625 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav4d-3A0A075B625 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav4d-3A0A075B625 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4d-3A0A075B625 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4d-3A0A075B625 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4d-3A0A075B625 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4d-3A0A075B625 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav4d-3A0A075B625 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4d-3A0A075B625 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Trav4d-3A0A075B625 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav4d-3A0A075B625 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4d-3A0A075B625 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4d-3A0A075B625 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4d-3A0A075B625 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4d-3A0A075B625 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4d-3A0A075B625 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4d-3A0A075B625 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4d-3A0A075B625 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4d-3A0A075B625 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4d-3A0A075B625 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4d-3A0A075B625 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Trav4d-3A0A075B625 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4d-3A0A075B625 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
Trav4d-3A0A075B625 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4d-3A0A075B625 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4d-3A0A075B625 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4d-3A0A075B625 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4d-3A0A075B625 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4d-3A0A075B625 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav4d-3A0A075B625 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4d-3A0A075B625 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav4d-3A0A075B625 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4d-3A0A075B625 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4d-3A0A075B625 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4d-3A0A075B625 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4d-3A0A075B625 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4d-3A0A075B625 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4d-3A0A075B625 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4d-3A0A075B625 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4d-3A0A075B625 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4d-3A0A075B625 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav4d-3A0A075B625 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4d-3A0A075B625 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4d-3A0A075B625 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4d-3A0A075B625 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4d-3A0A075B625 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4d-3A0A075B625 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4d-3A0A075B625 Gm12818-201ENSMUST00000117562 1349 ntBASIC13.78□□□□□ -0.2
Trav4d-3A0A075B625 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4d-3A0A075B625 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4d-3A0A075B625 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Trav4d-3A0A075B625 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4d-3A0A075B625 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4d-3A0A075B625 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4d-3A0A075B625 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav4d-3A0A075B625 AC122428.2-201ENSMUST00000216321 1832 ntBASIC13.78□□□□□ -0.2
Trav4d-3A0A075B625 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4d-3A0A075B625 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav4d-3A0A075B625 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav4d-3A0A075B625 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4d-3A0A075B625 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav4d-3A0A075B625 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4d-3A0A075B625 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4d-3A0A075B625 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4d-3A0A075B625 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4d-3A0A075B625 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4d-3A0A075B625 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4d-3A0A075B625 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav4d-3A0A075B625 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4d-3A0A075B625 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4d-3A0A075B625 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4d-3A0A075B625 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4d-3A0A075B625 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4d-3A0A075B625 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4d-3A0A075B625 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav4d-3A0A075B625 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav4d-3A0A075B625 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4d-3A0A075B625 Hsf1-204ENSMUST00000226872 2104 ntBASIC13.76□□□□□ -0.21
Trav4d-3A0A075B625 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4d-3A0A075B625 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4d-3A0A075B625 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4d-3A0A075B625 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4d-3A0A075B625 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4d-3A0A075B625 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4d-3A0A075B625 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav4d-3A0A075B625 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4d-3A0A075B625 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav4d-3A0A075B625 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4d-3A0A075B625 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Trav4d-3A0A075B625 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4d-3A0A075B625 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4d-3A0A075B625 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4d-3A0A075B625 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav4d-3A0A075B625 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4d-3A0A075B625 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms