Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.86■□□□□ 0.13
Trav9-1A0A075B601 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav9-1A0A075B601 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Trav9-1A0A075B601 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav9-1A0A075B601 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trav9-1A0A075B601 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav9-1A0A075B601 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9-1A0A075B601 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9-1A0A075B601 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9-1A0A075B601 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Trav9-1A0A075B601 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9-1A0A075B601 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.85■□□□□ 0.13
Trav9-1A0A075B601 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9-1A0A075B601 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav9-1A0A075B601 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9-1A0A075B601 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9-1A0A075B601 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9-1A0A075B601 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav9-1A0A075B601 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9-1A0A075B601 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9-1A0A075B601 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9-1A0A075B601 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9-1A0A075B601 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9-1A0A075B601 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9-1A0A075B601 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav9-1A0A075B601 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9-1A0A075B601 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9-1A0A075B601 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9-1A0A075B601 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.84■□□□□ 0.13
Trav9-1A0A075B601 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9-1A0A075B601 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9-1A0A075B601 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9-1A0A075B601 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.84■□□□□ 0.13
Trav9-1A0A075B601 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9-1A0A075B601 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Trav9-1A0A075B601 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav9-1A0A075B601 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav9-1A0A075B601 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9-1A0A075B601 Gm5921-201ENSMUST00000075898 882 ntBASIC15.83■□□□□ 0.12
Trav9-1A0A075B601 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9-1A0A075B601 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9-1A0A075B601 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9-1A0A075B601 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav9-1A0A075B601 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9-1A0A075B601 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Trav9-1A0A075B601 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9-1A0A075B601 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9-1A0A075B601 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9-1A0A075B601 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9-1A0A075B601 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9-1A0A075B601 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav9-1A0A075B601 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9-1A0A075B601 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9-1A0A075B601 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9-1A0A075B601 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9-1A0A075B601 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav9-1A0A075B601 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9-1A0A075B601 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9-1A0A075B601 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9-1A0A075B601 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9-1A0A075B601 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9-1A0A075B601 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav9-1A0A075B601 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9-1A0A075B601 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trav9-1A0A075B601 Gm43566-201ENSMUST00000196851 808 ntBASIC15.81■□□□□ 0.12
Trav9-1A0A075B601 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.81■□□□□ 0.12
Trav9-1A0A075B601 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trav9-1A0A075B601 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9-1A0A075B601 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9-1A0A075B601 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trav9-1A0A075B601 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9-1A0A075B601 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9-1A0A075B601 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9-1A0A075B601 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9-1A0A075B601 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav9-1A0A075B601 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav9-1A0A075B601 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9-1A0A075B601 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9-1A0A075B601 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9-1A0A075B601 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9-1A0A075B601 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9-1A0A075B601 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav9-1A0A075B601 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9-1A0A075B601 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trav9-1A0A075B601 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9-1A0A075B601 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9-1A0A075B601 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9-1A0A075B601 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9-1A0A075B601 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9-1A0A075B601 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9-1A0A075B601 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav9-1A0A075B601 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav9-1A0A075B601 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9-1A0A075B601 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9-1A0A075B601 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9-1A0A075B601 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.79■□□□□ 0.12
Trav9-1A0A075B601 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9-1A0A075B601 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9-1A0A075B601 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9-1A0A075B601 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms