Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Gm24934-201ENSMUST00000103764 111 ntBASIC11.95□□□□□ -0.5
Speer3W4VSP1 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Gm5530-201ENSMUST00000117185 985 ntBASIC11.95□□□□□ -0.5
Speer3W4VSP1 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.95□□□□□ -0.5
Speer3W4VSP1 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Gm27501-201ENSMUST00000183599 107 ntBASIC11.95□□□□□ -0.5
Speer3W4VSP1 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC11.95□□□□□ -0.5
Speer3W4VSP1 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Gm44364-201ENSMUST00000198368 141 ntBASIC11.95□□□□□ -0.5
Speer3W4VSP1 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Gm42879-201ENSMUST00000198656 2214 ntBASIC11.95□□□□□ -0.5
Speer3W4VSP1 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.95□□□□□ -0.5
Speer3W4VSP1 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC11.95□□□□□ -0.5
Speer3W4VSP1 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Speer3W4VSP1 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.94□□□□□ -0.5
Speer3W4VSP1 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.94□□□□□ -0.5
Speer3W4VSP1 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Btrc-209ENSMUST00000224478 2194 ntBASIC11.94□□□□□ -0.5
Speer3W4VSP1 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Gm11222-201ENSMUST00000119005 738 ntBASIC11.94□□□□□ -0.5
Speer3W4VSP1 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.94□□□□□ -0.5
Speer3W4VSP1 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.94□□□□□ -0.5
Speer3W4VSP1 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Gm17046-201ENSMUST00000168078 850 ntBASIC11.94□□□□□ -0.5
Speer3W4VSP1 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Gm2991-201ENSMUST00000173338 480 ntBASIC11.94□□□□□ -0.5
Speer3W4VSP1 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Gm4034-201ENSMUST00000187674 480 ntBASIC11.94□□□□□ -0.5
Speer3W4VSP1 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Gm43630-201ENSMUST00000201550 776 ntBASIC11.94□□□□□ -0.5
Speer3W4VSP1 Tas2r141-ps4-201ENSMUST00000205072 946 ntBASIC11.94□□□□□ -0.5
Speer3W4VSP1 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.94□□□□□ -0.5
Speer3W4VSP1 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Speer3W4VSP1 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 520.5 ms