Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm21969-201ENSMUST00000178644 4402 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 1700055D18Rik-202ENSMUST00000186030 3720 ntBASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Dis3l2-202ENSMUST00000168237 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Src-205ENSMUST00000109533 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Gm11618-201ENSMUST00000117946 267 ntBASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Gm9063-201ENSMUST00000223299 582 ntBASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Cdk7-205ENSMUST00000225990 1159 ntBASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Dhrs4-202ENSMUST00000226168 828 ntBASIC9.03□□□□□ -0.96
Smco4Q9JIS3 AC126253.1-202ENSMUST00000226732 835 ntBASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Rorc-201ENSMUST00000029795 2136 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Gm42826-201ENSMUST00000197548 2639 ntBASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Kcnj5-202ENSMUST00000214223 3101 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Acad10-202ENSMUST00000111770 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Cracr2a-203ENSMUST00000212051 7625 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Gm10531-201ENSMUST00000193527 2303 ntBASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Fgf17-202ENSMUST00000227123 1336 ntBASIC9.03□□□□□ -0.96
Smco4Q9JIS3 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Tsc2-203ENSMUST00000226284 6266 ntAPPRIS ALT2 BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Tnik-201ENSMUST00000159236 12276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Pcdh15-231ENSMUST00000177107 5696 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
Smco4Q9JIS3 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Smco4Q9JIS3 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC9.02□□□□□ -0.96
Smco4Q9JIS3 Zscan21-202ENSMUST00000080732 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Smco4Q9JIS3 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Smco4Q9JIS3 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Smco4Q9JIS3 Arhgap32-206ENSMUST00000182802 5621 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Smco4Q9JIS3 Stau1-202ENSMUST00000109235 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Smco4Q9JIS3 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC9.02□□□□□ -0.96
Smco4Q9JIS3 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.02□□□□□ -0.96
Smco4Q9JIS3 Mid1-202ENSMUST00000078947 3591 ntTSL 5 BASIC9.02□□□□□ -0.96
Smco4Q9JIS3 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Extl1-201ENSMUST00000030643 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Nrp2-206ENSMUST00000114157 6357 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Nuggc-201ENSMUST00000079469 2567 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Gm6114-201ENSMUST00000182472 968 ntBASIC9.02□□□□□ -0.97
Smco4Q9JIS3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 AC225888.1-201ENSMUST00000227184 728 ntBASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Gm24526-201ENSMUST00000082921 158 ntBASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Tnk2-206ENSMUST00000115125 4313 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 AC158777.1-201ENSMUST00000226216 1724 ntBASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Gm37962-201ENSMUST00000195535 2034 ntBASIC9.02□□□□□ -0.97
Smco4Q9JIS3 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms