Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Gm14017-201ENSMUST00000121934 386 ntBASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Gm23085-201ENSMUST00000157849 293 ntBASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Gm38151-201ENSMUST00000195085 289 ntBASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Gm43438-201ENSMUST00000198133 379 ntBASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Gm45575-201ENSMUST00000210283 548 ntBASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 4930552P12Rik-201ENSMUST00000181198 2496 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Stau1-202ENSMUST00000109235 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Gm37234-201ENSMUST00000193259 1441 ntBASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Gm10531-201ENSMUST00000193527 2303 ntBASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Gm7933-201ENSMUST00000191215 2255 ntBASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Gm8036-201ENSMUST00000118089 1718 ntBASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Gm27530-201ENSMUST00000184096 98 ntBASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Gm4482-201ENSMUST00000200876 742 ntBASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Gm4978-201ENSMUST00000071565 801 ntBASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Gm12799-201ENSMUST00000118151 2560 ntBASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf3c6Q9D8P7 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf3c6Q9D8P7 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf3c6Q9D8P7 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf3c6Q9D8P7 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Gtf3c6Q9D8P7 AC183268.1-201ENSMUST00000215753 2837 ntBASIC12.34□□□□□ -0.43
Gtf3c6Q9D8P7 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Gtf3c6Q9D8P7 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf3c6Q9D8P7 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf3c6Q9D8P7 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf3c6Q9D8P7 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf3c6Q9D8P7 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf3c6Q9D8P7 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Gtf3c6Q9D8P7 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf3c6Q9D8P7 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Gtf3c6Q9D8P7 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf3c6Q9D8P7 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms