Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Gm11560-201ENSMUST00000117567 948 ntBASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Gm13351-201ENSMUST00000118087 414 ntBASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Gm5342-201ENSMUST00000181982 1003 ntBASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Gm26982-201ENSMUST00000182250 1151 ntBASIC13.57□□□□□ -0.24
Stag1Q9D3E6 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Gm18776-201ENSMUST00000188833 654 ntBASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Gm30946-201ENSMUST00000198288 724 ntBASIC13.57□□□□□ -0.24
Stag1Q9D3E6 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Gm9111-201ENSMUST00000219394 709 ntBASIC13.57□□□□□ -0.24
Stag1Q9D3E6 AC154572.1-201ENSMUST00000226098 1204 ntBASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Gm4604-201ENSMUST00000025040 390 ntBASIC13.57□□□□□ -0.24
Stag1Q9D3E6 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Gm12969-201ENSMUST00000120199 1004 ntBASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Gm16030-201ENSMUST00000159098 603 ntBASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Gm3329-201ENSMUST00000159873 556 ntBASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Gm17192-201ENSMUST00000169031 511 ntBASIC13.56□□□□□ -0.24
Stag1Q9D3E6 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 AC134248.1-201ENSMUST00000216113 1176 ntBASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Gm9915-201ENSMUST00000066196 1383 ntBASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Gm18798-201ENSMUST00000187264 1700 ntBASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Stag1Q9D3E6 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.55□□□□□ -0.24
Stag1Q9D3E6 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Stag1Q9D3E6 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Stag1Q9D3E6 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Stag1Q9D3E6 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Stag1Q9D3E6 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.55□□□□□ -0.24
Stag1Q9D3E6 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.55□□□□□ -0.24
Stag1Q9D3E6 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Stag1Q9D3E6 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Stag1Q9D3E6 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Stag1Q9D3E6 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Stag1Q9D3E6 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Stag1Q9D3E6 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Stag1Q9D3E6 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Stag1Q9D3E6 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Stag1Q9D3E6 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Stag1Q9D3E6 Mir453-201ENSMUST00000104732 82 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms