Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 AC158777.1-201ENSMUST00000226216 1724 ntBASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssr1Q9CY50 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Gm22133-201ENSMUST00000102082 109 ntBASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Gm27627-201ENSMUST00000183644 150 ntBASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 AA914427-201ENSMUST00000193194 1166 ntBASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Gm17827-201ENSMUST00000211825 742 ntBASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Gm2553-201ENSMUST00000215986 605 ntBASIC12.4□□□□□ -0.42
Ssr1Q9CY50 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Gm5705-201ENSMUST00000066241 711 ntBASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Ccdc116-202ENSMUST00000115709 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ssr1Q9CY50 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Ssr1Q9CY50 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ssr1Q9CY50 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ssr1Q9CY50 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ssr1Q9CY50 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms