Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Krt88Q9CPR6 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Krt88Q9CPR6 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Krt88Q9CPR6 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Krt88Q9CPR6 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Gm25214-201ENSMUST00000104573 129 ntBASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.25□□□□□ -0.77
Krt88Q9CPR6 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Gm26047-201ENSMUST00000157308 113 ntBASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Gm5982-201ENSMUST00000196234 512 ntBASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Gm26047-202ENSMUST00000198840 115 ntBASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Gm19187-201ENSMUST00000206781 892 ntBASIC10.25□□□□□ -0.77
Krt88Q9CPR6 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Gm9823-201ENSMUST00000051212 327 ntBASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Gm5455-201ENSMUST00000058710 715 ntBASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.25□□□□□ -0.77
Krt88Q9CPR6 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.24□□□□□ -0.77
Krt88Q9CPR6 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Gm14071-201ENSMUST00000117817 509 ntBASIC10.24□□□□□ -0.77
Krt88Q9CPR6 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Gm11573-201ENSMUST00000119956 394 ntBASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Morn2-202ENSMUST00000227729 656 ntBASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Gm5705-201ENSMUST00000066241 711 ntBASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 192 ms