Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm5801-201ENSMUST00000182247 780 ntBASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 CT009550.1-201ENSMUST00000225750 864 ntBASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Krtap6-3-201ENSMUST00000079151 444 ntBASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Gm7781-201ENSMUST00000117258 788 ntBASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Gm17797-201ENSMUST00000182175 997 ntBASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 AC161172.1-201ENSMUST00000227801 486 ntBASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Gm42833-201ENSMUST00000196019 2124 ntBASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Gm13758-201ENSMUST00000118699 743 ntBASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Gm27675-201ENSMUST00000184527 94 ntBASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh15Q99PJ1 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Gm6713-201ENSMUST00000216137 1446 ntBASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Gm26532-201ENSMUST00000180630 690 ntBASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Gm19058-201ENSMUST00000192135 598 ntBASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Saa-ps-201ENSMUST00000211148 320 ntBASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Gm18122-201ENSMUST00000211390 904 ntBASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 AC155300.1-201ENSMUST00000219134 480 ntBASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Gm25483-201ENSMUST00000083224 227 ntBASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pcdh15Q99PJ1 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms