Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Gm12380-201ENSMUST00000119012 544 ntBASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Gm10807-201ENSMUST00000177134 795 ntBASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Gm8566-201ENSMUST00000120174 465 ntBASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Gm25668-201ENSMUST00000157700 129 ntBASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Gm17376-201ENSMUST00000166016 84 ntBASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Gm27530-201ENSMUST00000184096 98 ntBASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Gm6867-201ENSMUST00000219165 425 ntBASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cdk5rap3Q99LM2 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms