Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC14.04□□□□□ -0.16
RtcbQ99LF4 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Gm8019-201ENSMUST00000119317 587 ntBASIC14.04□□□□□ -0.16
RtcbQ99LF4 Gm8659-201ENSMUST00000120024 1084 ntBASIC14.04□□□□□ -0.16
RtcbQ99LF4 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC14.04□□□□□ -0.16
RtcbQ99LF4 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Gm16547-201ENSMUST00000159474 293 ntBASIC14.04□□□□□ -0.16
RtcbQ99LF4 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Gm18733-202ENSMUST00000174447 401 ntBASIC14.04□□□□□ -0.16
RtcbQ99LF4 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Gm45481-201ENSMUST00000209717 877 ntBASIC14.04□□□□□ -0.16
RtcbQ99LF4 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RtcbQ99LF4 AC121567.1-201ENSMUST00000227213 842 ntBASIC14.04□□□□□ -0.16
RtcbQ99LF4 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RtcbQ99LF4 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RtcbQ99LF4 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RtcbQ99LF4 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Gm37122-201ENSMUST00000195313 1567 ntBASIC14.04□□□□□ -0.16
RtcbQ99LF4 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RtcbQ99LF4 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.03□□□□□ -0.16
RtcbQ99LF4 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Gm24943-201ENSMUST00000158329 433 ntBASIC14.03□□□□□ -0.16
RtcbQ99LF4 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Gm25872-201ENSMUST00000177784 100 ntBASIC14.03□□□□□ -0.16
RtcbQ99LF4 Gm19927-201ENSMUST00000185792 781 ntBASIC14.03□□□□□ -0.16
RtcbQ99LF4 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
RtcbQ99LF4 CT025603.1-201ENSMUST00000224040 448 ntBASIC14.03□□□□□ -0.16
RtcbQ99LF4 Arhgef33-210ENSMUST00000225548 456 ntBASIC14.03□□□□□ -0.16
RtcbQ99LF4 AC158986.2-201ENSMUST00000227487 618 ntBASIC14.03□□□□□ -0.16
RtcbQ99LF4 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Gm6641-201ENSMUST00000196100 1315 ntBASIC14.03□□□□□ -0.16
RtcbQ99LF4 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RtcbQ99LF4 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RtcbQ99LF4 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RtcbQ99LF4 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
RtcbQ99LF4 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RtcbQ99LF4 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RtcbQ99LF4 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
RtcbQ99LF4 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RtcbQ99LF4 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RtcbQ99LF4 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms