Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Mrip-ps-201ENSMUST00000184613 940 ntBASIC13.42□□□□□ -0.26
Col20a1Q923P0 Gm9369-201ENSMUST00000196009 733 ntBASIC13.42□□□□□ -0.26
Col20a1Q923P0 Gm42655-201ENSMUST00000202782 1134 ntBASIC13.42□□□□□ -0.26
Col20a1Q923P0 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Col20a1Q923P0 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.42□□□□□ -0.26
Col20a1Q923P0 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col20a1Q923P0 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.42□□□□□ -0.26
Col20a1Q923P0 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Gm5308-201ENSMUST00000196752 1354 ntBASIC13.42□□□□□ -0.26
Col20a1Q923P0 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col20a1Q923P0 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col20a1Q923P0 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Gm25880-201ENSMUST00000104331 132 ntBASIC13.41□□□□□ -0.26
Col20a1Q923P0 Gm6322-201ENSMUST00000118789 1004 ntBASIC13.41□□□□□ -0.26
Col20a1Q923P0 Gm12990-201ENSMUST00000120372 468 ntBASIC13.41□□□□□ -0.26
Col20a1Q923P0 Gm4917-201ENSMUST00000121452 650 ntBASIC13.41□□□□□ -0.26
Col20a1Q923P0 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col20a1Q923P0 AC238811.4-201ENSMUST00000178019 1246 ntBASIC13.41□□□□□ -0.26
Col20a1Q923P0 AC238940.3-201ENSMUST00000178830 1246 ntBASIC13.41□□□□□ -0.26
Col20a1Q923P0 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Gm18798-201ENSMUST00000187264 1700 ntBASIC13.41□□□□□ -0.26
Col20a1Q923P0 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC13.41□□□□□ -0.26
Col20a1Q923P0 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC13.41□□□□□ -0.26
Col20a1Q923P0 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.41□□□□□ -0.26
Col20a1Q923P0 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.41□□□□□ -0.26
Col20a1Q923P0 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.41□□□□□ -0.26
Col20a1Q923P0 AC154305.2-201ENSMUST00000225813 901 ntBASIC13.41□□□□□ -0.26
Col20a1Q923P0 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col20a1Q923P0 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC13.41□□□□□ -0.26
Col20a1Q923P0 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Col20a1Q923P0 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col20a1Q923P0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Gm9244-201ENSMUST00000056767 2129 ntBASIC13.41□□□□□ -0.26
Col20a1Q923P0 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col20a1Q923P0 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col20a1Q923P0 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col20a1Q923P0 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col20a1Q923P0 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.4□□□□□ -0.26
Col20a1Q923P0 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col20a1Q923P0 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Col20a1Q923P0 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col20a1Q923P0 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Col20a1Q923P0 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Col20a1Q923P0 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col20a1Q923P0 Mup-ps29-201ENSMUST00000122281 202 ntBASIC13.4□□□□□ -0.26
Col20a1Q923P0 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC13.4□□□□□ -0.26
Col20a1Q923P0 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC13.4□□□□□ -0.26
Col20a1Q923P0 Gm23218-201ENSMUST00000158124 276 ntBASIC13.4□□□□□ -0.26
Col20a1Q923P0 Gm26982-201ENSMUST00000182250 1151 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms