Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Snord17-201ENSMUST00000104526 238 ntBASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Gm9062-201ENSMUST00000117712 727 ntBASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Gm15615-201ENSMUST00000118876 198 ntBASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Gm25492-201ENSMUST00000157383 129 ntBASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Gm19891-201ENSMUST00000189771 303 ntBASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Pcdhb6Q91XZ4 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhb6Q91XZ4 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhb6Q91XZ4 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb6Q91XZ4 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhb6Q91XZ4 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb6Q91XZ4 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhb6Q91XZ4 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb6Q91XZ4 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb6Q91XZ4 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb6Q91XZ4 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb6Q91XZ4 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb6Q91XZ4 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.66□□□□□ -0.54
Pcdhb6Q91XZ4 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb6Q91XZ4 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb6Q91XZ4 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb6Q91XZ4 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhb6Q91XZ4 Gm8111-201ENSMUST00000117659 987 ntBASIC11.66□□□□□ -0.54
Pcdhb6Q91XZ4 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.66□□□□□ -0.54
Pcdhb6Q91XZ4 Gm16219-201ENSMUST00000120096 274 ntBASIC11.66□□□□□ -0.54
Pcdhb6Q91XZ4 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.66□□□□□ -0.54
Pcdhb6Q91XZ4 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.66□□□□□ -0.54
Pcdhb6Q91XZ4 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.66□□□□□ -0.54
Pcdhb6Q91XZ4 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms