Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13□□□□□ -0.33
Trex1Q91XB0 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Gm10020-201ENSMUST00000081993 612 ntBASIC13□□□□□ -0.33
Trex1Q91XB0 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trex1Q91XB0 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trex1Q91XB0 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trex1Q91XB0 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trex1Q91XB0 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trex1Q91XB0 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC13□□□□□ -0.33
Trex1Q91XB0 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.99□□□□□ -0.33
Trex1Q91XB0 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Snord17-201ENSMUST00000104526 238 ntBASIC12.99□□□□□ -0.33
Trex1Q91XB0 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Gm6158-201ENSMUST00000109467 904 ntBASIC12.99□□□□□ -0.33
Trex1Q91XB0 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.99□□□□□ -0.33
Trex1Q91XB0 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Gm17214-201ENSMUST00000164501 541 ntBASIC12.99□□□□□ -0.33
Trex1Q91XB0 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Gm42430-201ENSMUST00000197209 616 ntBASIC12.99□□□□□ -0.33
Trex1Q91XB0 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trex1Q91XB0 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Gm14234-201ENSMUST00000119539 845 ntBASIC12.98□□□□□ -0.33
Trex1Q91XB0 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Gm8451-201ENSMUST00000170338 447 ntBASIC12.98□□□□□ -0.33
Trex1Q91XB0 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Gm34379-201ENSMUST00000195036 290 ntBASIC12.98□□□□□ -0.33
Trex1Q91XB0 Gm42867-201ENSMUST00000202995 469 ntBASIC12.98□□□□□ -0.33
Trex1Q91XB0 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Gm7536-201ENSMUST00000077389 444 ntBASIC12.98□□□□□ -0.33
Trex1Q91XB0 Gm5453-201ENSMUST00000080866 447 ntBASIC12.98□□□□□ -0.33
Trex1Q91XB0 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms