Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Gm9244-201ENSMUST00000056767 2129 ntBASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Gm18210-201ENSMUST00000209001 1524 ntBASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Gm14274-201ENSMUST00000117182 615 ntBASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Mir6941-201ENSMUST00000184711 59 ntBASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Gm7902-201ENSMUST00000198842 947 ntBASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Gm9487-201ENSMUST00000216600 472 ntBASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Gm18499-201ENSMUST00000220808 1021 ntBASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 AC140375.1-201ENSMUST00000225421 694 ntBASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Chmp7Q8R1T1 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp7Q8R1T1 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC14.52□□□□□ -0.08
Chmp7Q8R1T1 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp7Q8R1T1 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp7Q8R1T1 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp7Q8R1T1 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Chmp7Q8R1T1 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp7Q8R1T1 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp7Q8R1T1 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Chmp7Q8R1T1 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp7Q8R1T1 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Chmp7Q8R1T1 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp7Q8R1T1 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp7Q8R1T1 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp7Q8R1T1 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Chmp7Q8R1T1 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp7Q8R1T1 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp7Q8R1T1 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 Gm11354-201ENSMUST00000121974 422 ntBASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 Gm35960-201ENSMUST00000202712 767 ntBASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp7Q8R1T1 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms