Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.72□□□□□ -0.69
Clrn1Q8K445 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Gm11956-201ENSMUST00000119525 512 ntBASIC10.72□□□□□ -0.69
Clrn1Q8K445 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Gm22144-201ENSMUST00000157402 102 ntBASIC10.72□□□□□ -0.69
Clrn1Q8K445 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Gm43378-201ENSMUST00000199336 582 ntBASIC10.72□□□□□ -0.69
Clrn1Q8K445 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.72□□□□□ -0.69
Clrn1Q8K445 Gm8574-201ENSMUST00000203207 924 ntBASIC10.72□□□□□ -0.69
Clrn1Q8K445 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Abhd11os-203ENSMUST00000222613 363 ntBASIC10.72□□□□□ -0.69
Clrn1Q8K445 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Gm37648-201ENSMUST00000192072 2563 ntBASIC10.72□□□□□ -0.69
Clrn1Q8K445 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.72□□□□□ -0.69
Clrn1Q8K445 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Clrn1Q8K445 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Gm15329-201ENSMUST00000121408 155 ntBASIC10.71□□□□□ -0.69
Clrn1Q8K445 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.71□□□□□ -0.69
Clrn1Q8K445 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Gm18367-201ENSMUST00000176139 600 ntBASIC10.71□□□□□ -0.69
Clrn1Q8K445 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.71□□□□□ -0.69
Clrn1Q8K445 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Clrn1Q8K445 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.71□□□□□ -0.69
Clrn1Q8K445 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.71□□□□□ -0.69
Clrn1Q8K445 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.7
Clrn1Q8K445 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Clrn1Q8K445 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.7
Clrn1Q8K445 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Clrn1Q8K445 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.7□□□□□ -0.7
Clrn1Q8K445 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.7□□□□□ -0.7
Clrn1Q8K445 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.7□□□□□ -0.7
Clrn1Q8K445 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms