Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Gm20426-201ENSMUST00000173657 440 ntBASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rfwd3Q8CIK8 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Gm15352-201ENSMUST00000118696 270 ntBASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Gm3786-201ENSMUST00000202659 378 ntBASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 AC159819.2-201ENSMUST00000216151 342 ntBASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfwd3Q8CIK8 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Gm14071-201ENSMUST00000117817 509 ntBASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Gm13408-201ENSMUST00000119822 798 ntBASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Gm15432-201ENSMUST00000121106 195 ntBASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Gm13935-201ENSMUST00000121859 798 ntBASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Gm7150-201ENSMUST00000122032 981 ntBASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms