Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
ShfQ8CG80 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
ShfQ8CG80 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
ShfQ8CG80 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
ShfQ8CG80 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
ShfQ8CG80 Gm14723-201ENSMUST00000118686 215 ntBASIC10.13□□□□□ -0.79
ShfQ8CG80 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.13□□□□□ -0.79
ShfQ8CG80 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.13□□□□□ -0.79
ShfQ8CG80 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.13□□□□□ -0.79
ShfQ8CG80 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
ShfQ8CG80 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.13□□□□□ -0.79
ShfQ8CG80 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.13□□□□□ -0.79
ShfQ8CG80 Gm25668-201ENSMUST00000157700 129 ntBASIC10.13□□□□□ -0.79
ShfQ8CG80 Gm24074-201ENSMUST00000158178 260 ntBASIC10.13□□□□□ -0.79
ShfQ8CG80 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
ShfQ8CG80 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
ShfQ8CG80 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.13□□□□□ -0.79
ShfQ8CG80 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.13□□□□□ -0.79
ShfQ8CG80 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
ShfQ8CG80 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
ShfQ8CG80 Gm8100-201ENSMUST00000182906 988 ntBASIC10.13□□□□□ -0.79
ShfQ8CG80 Gm27320-201ENSMUST00000184892 109 ntBASIC10.13□□□□□ -0.79
ShfQ8CG80 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
ShfQ8CG80 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.13□□□□□ -0.79
ShfQ8CG80 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.13□□□□□ -0.79
ShfQ8CG80 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.13□□□□□ -0.79
ShfQ8CG80 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.13□□□□□ -0.79
ShfQ8CG80 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.13□□□□□ -0.79
ShfQ8CG80 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
ShfQ8CG80 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
ShfQ8CG80 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
ShfQ8CG80 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
ShfQ8CG80 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
ShfQ8CG80 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
ShfQ8CG80 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
ShfQ8CG80 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.13□□□□□ -0.79
ShfQ8CG80 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
ShfQ8CG80 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
ShfQ8CG80 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
ShfQ8CG80 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
ShfQ8CG80 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
ShfQ8CG80 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
ShfQ8CG80 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
ShfQ8CG80 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
ShfQ8CG80 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
ShfQ8CG80 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
ShfQ8CG80 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
ShfQ8CG80 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
ShfQ8CG80 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
ShfQ8CG80 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
ShfQ8CG80 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
ShfQ8CG80 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.12□□□□□ -0.79
ShfQ8CG80 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
ShfQ8CG80 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
ShfQ8CG80 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
ShfQ8CG80 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.12□□□□□ -0.79
ShfQ8CG80 Gm27530-201ENSMUST00000184096 98 ntBASIC10.12□□□□□ -0.79
ShfQ8CG80 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.12□□□□□ -0.79
ShfQ8CG80 Gm37597-201ENSMUST00000191853 382 ntBASIC10.12□□□□□ -0.79
ShfQ8CG80 Gm7783-201ENSMUST00000204795 781 ntBASIC10.12□□□□□ -0.79
ShfQ8CG80 Gm44262-201ENSMUST00000204969 372 ntBASIC10.12□□□□□ -0.79
ShfQ8CG80 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
ShfQ8CG80 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
ShfQ8CG80 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
ShfQ8CG80 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
ShfQ8CG80 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.12□□□□□ -0.79
ShfQ8CG80 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
ShfQ8CG80 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
ShfQ8CG80 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
ShfQ8CG80 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.12□□□□□ -0.79
ShfQ8CG80 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
ShfQ8CG80 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
ShfQ8CG80 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
ShfQ8CG80 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
ShfQ8CG80 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
ShfQ8CG80 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
ShfQ8CG80 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
ShfQ8CG80 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.12□□□□□ -0.79
ShfQ8CG80 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.12□□□□□ -0.79
ShfQ8CG80 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
ShfQ8CG80 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.12□□□□□ -0.79
ShfQ8CG80 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
ShfQ8CG80 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
ShfQ8CG80 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
ShfQ8CG80 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
ShfQ8CG80 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
ShfQ8CG80 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
ShfQ8CG80 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.11□□□□□ -0.79
ShfQ8CG80 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
ShfQ8CG80 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
ShfQ8CG80 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
ShfQ8CG80 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
ShfQ8CG80 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
ShfQ8CG80 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
ShfQ8CG80 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
ShfQ8CG80 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
ShfQ8CG80 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
ShfQ8CG80 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.11□□□□□ -0.79
ShfQ8CG80 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
ShfQ8CG80 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms