Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Smc5Q8CG46 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smc5Q8CG46 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.02□□□□□ -0.17
Smc5Q8CG46 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Smc5Q8CG46 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.02□□□□□ -0.17
Smc5Q8CG46 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Smc5Q8CG46 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smc5Q8CG46 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC14.02□□□□□ -0.17
Smc5Q8CG46 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc5Q8CG46 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smc5Q8CG46 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc5Q8CG46 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc5Q8CG46 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smc5Q8CG46 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc5Q8CG46 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc5Q8CG46 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc5Q8CG46 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc5Q8CG46 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smc5Q8CG46 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smc5Q8CG46 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smc5Q8CG46 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Gm13916-201ENSMUST00000117368 628 ntBASIC14.01□□□□□ -0.17
Smc5Q8CG46 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smc5Q8CG46 CT009713.8-202ENSMUST00000224732 385 ntBASIC14.01□□□□□ -0.17
Smc5Q8CG46 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smc5Q8CG46 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smc5Q8CG46 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smc5Q8CG46 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Smc5Q8CG46 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC14□□□□□ -0.17
Smc5Q8CG46 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smc5Q8CG46 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC14□□□□□ -0.17
Smc5Q8CG46 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc5Q8CG46 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Smc5Q8CG46 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc5Q8CG46 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smc5Q8CG46 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smc5Q8CG46 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC14□□□□□ -0.17
Smc5Q8CG46 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc5Q8CG46 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14□□□□□ -0.17
Smc5Q8CG46 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smc5Q8CG46 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc5Q8CG46 Gm12247-201ENSMUST00000117585 670 ntBASIC14□□□□□ -0.17
Smc5Q8CG46 Gm11573-201ENSMUST00000119956 394 ntBASIC14□□□□□ -0.17
Smc5Q8CG46 Gm13263-201ENSMUST00000121271 838 ntBASIC14□□□□□ -0.17
Smc5Q8CG46 Gm8199-201ENSMUST00000121323 823 ntBASIC14□□□□□ -0.17
Smc5Q8CG46 Gm15329-201ENSMUST00000121408 155 ntBASIC14□□□□□ -0.17
Smc5Q8CG46 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smc5Q8CG46 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smc5Q8CG46 Gm24074-201ENSMUST00000158178 260 ntBASIC14□□□□□ -0.17
Smc5Q8CG46 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC14□□□□□ -0.17
Smc5Q8CG46 Gm7504-201ENSMUST00000201449 424 ntBASIC14□□□□□ -0.17
Smc5Q8CG46 Gm43630-201ENSMUST00000201550 776 ntBASIC14□□□□□ -0.17
Smc5Q8CG46 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Smc5Q8CG46 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc5Q8CG46 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc5Q8CG46 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC14□□□□□ -0.17
Smc5Q8CG46 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Smc5Q8CG46 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smc5Q8CG46 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC14□□□□□ -0.17
Smc5Q8CG46 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc5Q8CG46 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14□□□□□ -0.17
Smc5Q8CG46 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC14□□□□□ -0.17
Smc5Q8CG46 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc5Q8CG46 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Smc5Q8CG46 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc5Q8CG46 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Smc5Q8CG46 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smc5Q8CG46 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smc5Q8CG46 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC13.99□□□□□ -0.17
Smc5Q8CG46 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Smc5Q8CG46 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc5Q8CG46 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smc5Q8CG46 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Smc5Q8CG46 Gm15549-201ENSMUST00000121595 622 ntBASIC13.99□□□□□ -0.17
Smc5Q8CG46 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smc5Q8CG46 Gm3150-201ENSMUST00000166418 204 ntBASIC13.99□□□□□ -0.17
Smc5Q8CG46 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms