Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.47
Ccdc87Q8CDL9 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ccdc87Q8CDL9 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Ccdc87Q8CDL9 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Ccdc87Q8CDL9 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Ccdc87Q8CDL9 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Ccdc87Q8CDL9 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ccdc87Q8CDL9 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Gm22133-201ENSMUST00000102082 109 ntBASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Gm26286-201ENSMUST00000104166 134 ntBASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Mir6927-201ENSMUST00000184494 71 ntBASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Gm7003-201ENSMUST00000195089 312 ntBASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Gm5982-201ENSMUST00000196234 512 ntBASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc87Q8CDL9 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Gm7857-201ENSMUST00000117957 358 ntBASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Gm12217-201ENSMUST00000118858 696 ntBASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Gm5616-201ENSMUST00000165252 384 ntBASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Gm8741-201ENSMUST00000174736 384 ntBASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Gm37666-201ENSMUST00000194110 866 ntBASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms