Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Gm14644-201ENSMUST00000116671 647 ntBASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Gm14028-201ENSMUST00000117434 479 ntBASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Gm5070-201ENSMUST00000177599 862 ntBASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Gm18827-201ENSMUST00000188341 790 ntBASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Gm8385-201ENSMUST00000058999 643 ntBASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lrif1Q8CDD9 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms