Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Gm15566-201ENSMUST00000121130 590 ntBASIC13.27□□□□□ -0.29
Vps53Q8CCB4 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Gm23045-201ENSMUST00000175041 96 ntBASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Gm2553-201ENSMUST00000215986 605 ntBASIC13.27□□□□□ -0.29
Vps53Q8CCB4 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Gm9873-201ENSMUST00000063891 1097 ntBASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Gm15991-202ENSMUST00000212123 3565 ntBASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps53Q8CCB4 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Gm37299-201ENSMUST00000193951 826 ntBASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Gm42518-201ENSMUST00000196277 938 ntBASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Mirlet7i-201ENSMUST00000083472 85 ntBASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps53Q8CCB4 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Gm11340-201ENSMUST00000119226 412 ntBASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Gm1848-201ENSMUST00000120711 789 ntBASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Gm22442-201ENSMUST00000157256 144 ntBASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Gm6485-201ENSMUST00000160676 439 ntBASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Gm6407-201ENSMUST00000176468 549 ntBASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Mir6998-201ENSMUST00000183343 64 ntBASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Gm9645-201ENSMUST00000197131 792 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms