Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm23694-201ENSMUST00000179335 110 ntBASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Mir8115-201ENSMUST00000184992 119 ntBASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Gm15528-201ENSMUST00000117821 864 ntBASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim9Q8C7M3 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Gm16166-201ENSMUST00000118291 787 ntBASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Gm12566-201ENSMUST00000121479 359 ntBASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Gm4726-201ENSMUST00000135604 736 ntBASIC12.5□□□□□ -0.41
Trim9Q8C7M3 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Gm6019-201ENSMUST00000148369 736 ntBASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Gm23045-201ENSMUST00000175041 96 ntBASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Gm21092-201ENSMUST00000178995 955 ntBASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Mir7070-201ENSMUST00000183657 86 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms