Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Gm12419-201ENSMUST00000116649 636 ntBASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Gm11836-201ENSMUST00000121022 441 ntBASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Mir7686-201ENSMUST00000200604 57 ntBASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Gm43852-201ENSMUST00000202098 917 ntBASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Gm8111-201ENSMUST00000117659 987 ntBASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Gm23699-201ENSMUST00000158835 135 ntBASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Mir5120-201ENSMUST00000175020 78 ntBASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Gm37981-201ENSMUST00000194280 535 ntBASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trub1Q8C0D0 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trub1Q8C0D0 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trub1Q8C0D0 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Trub1Q8C0D0 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trub1Q8C0D0 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.71□□□□□ -0.54
Trub1Q8C0D0 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trub1Q8C0D0 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.71□□□□□ -0.54
Trub1Q8C0D0 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trub1Q8C0D0 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.71□□□□□ -0.54
Trub1Q8C0D0 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Gm11956-201ENSMUST00000119525 512 ntBASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.7□□□□□ -0.54
Trub1Q8C0D0 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Spcs1-203ENSMUST00000226374 592 ntBASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trub1Q8C0D0 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.7□□□□□ -0.54
Trub1Q8C0D0 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms