Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Gm13809-201ENSMUST00000117921 597 ntBASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Gm15595-201ENSMUST00000120840 961 ntBASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Gm12176-201ENSMUST00000121420 875 ntBASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Gm10051-201ENSMUST00000145209 414 ntBASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Gm42997-202ENSMUST00000200321 985 ntBASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Gm43947-201ENSMUST00000203019 959 ntBASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Gm6867-201ENSMUST00000219165 425 ntBASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Ginm1-202ENSMUST00000065124 300 ntBASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cpsf4Q8BQZ5 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.64
Cpsf4Q8BQZ5 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.02□□□□□ -0.64
Cpsf4Q8BQZ5 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cpsf4Q8BQZ5 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cpsf4Q8BQZ5 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cpsf4Q8BQZ5 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cpsf4Q8BQZ5 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.02□□□□□ -0.64
Cpsf4Q8BQZ5 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC11.02□□□□□ -0.64
Cpsf4Q8BQZ5 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Gm12579-201ENSMUST00000118040 783 ntBASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Gm15207-201ENSMUST00000119259 442 ntBASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Gm28937-201ENSMUST00000185413 695 ntBASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Gm29400-201ENSMUST00000187208 695 ntBASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Gm28662-201ENSMUST00000188446 695 ntBASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Gm28251-201ENSMUST00000188835 695 ntBASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Gm37318-201ENSMUST00000194325 695 ntBASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Gm38017-201ENSMUST00000194768 695 ntBASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Gm37287-201ENSMUST00000195449 695 ntBASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Gm37793-201ENSMUST00000195548 695 ntBASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Gm45118-201ENSMUST00000208928 825 ntBASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cpsf4Q8BQZ5 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.01□□□□□ -0.65
Cpsf4Q8BQZ5 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms