Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 Gm15207-201ENSMUST00000119259 442 ntBASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 Gm13665-201ENSMUST00000120830 528 ntBASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 Gm44364-201ENSMUST00000198368 141 ntBASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 AY036118-201ENSMUST00000200021 923 ntBASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.65□□□□□ -0.54
Chmp2bQ8BJF9 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Chmp2bQ8BJF9 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chmp2bQ8BJF9 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chmp2bQ8BJF9 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chmp2bQ8BJF9 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.65□□□□□ -0.55
Chmp2bQ8BJF9 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.65□□□□□ -0.55
Chmp2bQ8BJF9 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Chmp2bQ8BJF9 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chmp2bQ8BJF9 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chmp2bQ8BJF9 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Gm29615-201ENSMUST00000185371 697 ntBASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Gm28224-201ENSMUST00000186078 697 ntBASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Gm29001-201ENSMUST00000186177 697 ntBASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Gm28292-201ENSMUST00000186593 697 ntBASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Gm28101-201ENSMUST00000187608 697 ntBASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Gm29076-201ENSMUST00000187689 697 ntBASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Gm28302-201ENSMUST00000187931 697 ntBASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Gm28646-201ENSMUST00000188220 697 ntBASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Gm28205-201ENSMUST00000189177 697 ntBASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Gm29032-201ENSMUST00000189797 697 ntBASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Gm28695-201ENSMUST00000190300 697 ntBASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Gm37448-201ENSMUST00000192795 697 ntBASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Gm45113-201ENSMUST00000207518 165 ntBASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Gm8913-201ENSMUST00000209491 641 ntBASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms