Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Gm4034-201ENSMUST00000187674 480 ntBASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Gm37458-201ENSMUST00000194055 410 ntBASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Gm44863-201ENSMUST00000207613 1422 ntBASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Gm23912-201ENSMUST00000104687 87 ntBASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Gm9916-201ENSMUST00000192943 1228 ntBASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Gm29763-201ENSMUST00000205306 616 ntBASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Gm6855-201ENSMUST00000206307 790 ntBASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Olfr692-202ENSMUST00000217827 1126 ntBASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 AC154186.1-201ENSMUST00000227711 1597 ntBASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf38bQ80SY5 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms