Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Scaf4Q6PFF0 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Scaf4Q6PFF0 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Scaf4Q6PFF0 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Scaf4Q6PFF0 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Gm15207-201ENSMUST00000119259 442 ntBASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Gm11783-201ENSMUST00000119549 885 ntBASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Gm26047-201ENSMUST00000157308 113 ntBASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Gm37102-201ENSMUST00000195740 1105 ntBASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Gm26047-202ENSMUST00000198840 115 ntBASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Gm9353-201ENSMUST00000200472 604 ntBASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Gm45113-201ENSMUST00000207518 165 ntBASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Gm17827-201ENSMUST00000211825 742 ntBASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.2□□□□□ -0.62
Scaf4Q6PFF0 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Gm21769-201ENSMUST00000211922 111 ntBASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Gm4978-201ENSMUST00000071565 801 ntBASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms