Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Gm45433-201ENSMUST00000209386 247 ntBASIC12.57□□□□□ -0.4
Krt39Q6IFX4 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Gm270-201ENSMUST00000223010 976 ntBASIC12.57□□□□□ -0.4
Krt39Q6IFX4 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.56□□□□□ -0.4
Krt39Q6IFX4 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.56□□□□□ -0.4
Krt39Q6IFX4 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Gm3332-201ENSMUST00000189337 928 ntBASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Gm38151-201ENSMUST00000195085 289 ntBASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Gm45186-201ENSMUST00000206874 478 ntBASIC12.56□□□□□ -0.4
Krt39Q6IFX4 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.56□□□□□ -0.4
Krt39Q6IFX4 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Gm4978-201ENSMUST00000071565 801 ntBASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Krt39Q6IFX4 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.55□□□□□ -0.4
Krt39Q6IFX4 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Gm12857-201ENSMUST00000117678 592 ntBASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Gm6867-201ENSMUST00000219165 425 ntBASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Gm8385-201ENSMUST00000058999 643 ntBASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms