Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VcanQ62059 Odam-201ENSMUST00000113274 872 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VcanQ62059 Gm5944-201ENSMUST00000118182 1001 ntBASIC10.35□□□□□ -0.75
VcanQ62059 Gm15702-201ENSMUST00000119680 444 ntBASIC10.35□□□□□ -0.75
VcanQ62059 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC10.35□□□□□ -0.75
VcanQ62059 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.35□□□□□ -0.75
VcanQ62059 Gm9273-201ENSMUST00000200606 715 ntBASIC10.35□□□□□ -0.75
VcanQ62059 Gm9790-201ENSMUST00000054148 288 ntBASIC10.35□□□□□ -0.75
VcanQ62059 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
VcanQ62059 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VcanQ62059 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.35□□□□□ -0.75
VcanQ62059 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VcanQ62059 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
VcanQ62059 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VcanQ62059 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VcanQ62059 Kcnk2-209ENSMUST00000194402 1373 ntTSL 5 BASIC10.35□□□□□ -0.75
VcanQ62059 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VcanQ62059 Gm5764-201ENSMUST00000118817 885 ntBASIC10.35□□□□□ -0.75
VcanQ62059 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VcanQ62059 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.35□□□□□ -0.75
VcanQ62059 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VcanQ62059 Gm12424-201ENSMUST00000179673 447 ntBASIC10.35□□□□□ -0.75
VcanQ62059 Gm3052-201ENSMUST00000186409 829 ntBASIC10.35□□□□□ -0.75
VcanQ62059 Gm28653-202ENSMUST00000227082 521 ntBASIC10.35□□□□□ -0.75
VcanQ62059 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VcanQ62059 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VcanQ62059 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VcanQ62059 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
VcanQ62059 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
VcanQ62059 Gm42974-201ENSMUST00000199556 2654 ntBASIC10.35□□□□□ -0.75
VcanQ62059 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
VcanQ62059 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC10.35□□□□□ -0.75
VcanQ62059 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.35□□□□□ -0.75
VcanQ62059 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.35□□□□□ -0.75
VcanQ62059 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
VcanQ62059 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VcanQ62059 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
VcanQ62059 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
VcanQ62059 Gm18859-201ENSMUST00000118792 825 ntBASIC10.34□□□□□ -0.75
VcanQ62059 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC10.34□□□□□ -0.75
VcanQ62059 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.34□□□□□ -0.75
VcanQ62059 Gm7456-201ENSMUST00000182862 1011 ntBASIC10.34□□□□□ -0.75
VcanQ62059 Gm6317-201ENSMUST00000183159 1000 ntBASIC10.34□□□□□ -0.75
VcanQ62059 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC10.34□□□□□ -0.75
VcanQ62059 Gm7880-201ENSMUST00000203748 871 ntBASIC10.34□□□□□ -0.75
VcanQ62059 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.34□□□□□ -0.75
VcanQ62059 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 AC139155.1-201ENSMUST00000226043 444 ntBASIC10.34□□□□□ -0.75
VcanQ62059 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
VcanQ62059 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
VcanQ62059 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
VcanQ62059 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
VcanQ62059 Gm6038-201ENSMUST00000154310 948 ntBASIC10.34□□□□□ -0.75
VcanQ62059 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 Gm4753-201ENSMUST00000188327 1255 ntBASIC10.34□□□□□ -0.75
VcanQ62059 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC10.34□□□□□ -0.75
VcanQ62059 Gm44159-201ENSMUST00000204065 442 ntBASIC10.34□□□□□ -0.75
VcanQ62059 Snrp1c-ps1-201ENSMUST00000205464 474 ntBASIC10.34□□□□□ -0.75
VcanQ62059 Gm44649-202ENSMUST00000206896 635 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC10.34□□□□□ -0.75
VcanQ62059 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC10.34□□□□□ -0.75
VcanQ62059 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.34□□□□□ -0.75
VcanQ62059 AC156561.1-201ENSMUST00000224774 233 ntBASIC10.34□□□□□ -0.75
VcanQ62059 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 Pla2g2a-201ENSMUST00000077582 784 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
VcanQ62059 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.34□□□□□ -0.75
VcanQ62059 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
VcanQ62059 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
VcanQ62059 Mir675-201ENSMUST00000102320 84 ntBASIC10.34□□□□□ -0.75
VcanQ62059 Gng12-207ENSMUST00000114228 748 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC10.34□□□□□ -0.75
VcanQ62059 Gm15539-201ENSMUST00000118452 566 ntBASIC10.34□□□□□ -0.75
VcanQ62059 Gm6276-201ENSMUST00000120159 579 ntBASIC10.34□□□□□ -0.75
VcanQ62059 Gm5270-201ENSMUST00000121506 1002 ntBASIC10.34□□□□□ -0.75
VcanQ62059 Gm12679-201ENSMUST00000123899 636 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC10.34□□□□□ -0.75
VcanQ62059 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VcanQ62059 H2-Pb-201ENSMUST00000172731 531 ntBASIC10.34□□□□□ -0.75
VcanQ62059 Ube2i-214ENSMUST00000174216 1144 ntTSL 2 BASIC10.34□□□□□ -0.75
VcanQ62059 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.34□□□□□ -0.75
VcanQ62059 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC10.34□□□□□ -0.75
VcanQ62059 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms