Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Sox17Q61473 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.61□□□□□ -0.71
Sox17Q61473 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Sox17Q61473 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC10.61□□□□□ -0.71
Sox17Q61473 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 Gm23270-201ENSMUST00000104055 131 ntBASIC10.61□□□□□ -0.71
Sox17Q61473 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Sox17Q61473 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Sox17Q61473 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.61□□□□□ -0.71
Sox17Q61473 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.61□□□□□ -0.71
Sox17Q61473 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.61□□□□□ -0.71
Sox17Q61473 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Sox17Q61473 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
Sox17Q61473 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Sox17Q61473 Gm20495-201ENSMUST00000173902 235 ntBASIC10.61□□□□□ -0.71
Sox17Q61473 Gm4310-201ENSMUST00000177847 889 ntBASIC10.61□□□□□ -0.71
Sox17Q61473 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.61□□□□□ -0.71
Sox17Q61473 Gm7046-201ENSMUST00000221351 977 ntBASIC10.61□□□□□ -0.71
Sox17Q61473 Gm9823-201ENSMUST00000051212 327 ntBASIC10.61□□□□□ -0.71
Sox17Q61473 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Sox17Q61473 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC10.61□□□□□ -0.71
Sox17Q61473 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.61□□□□□ -0.71
Sox17Q61473 Gm19040-201ENSMUST00000203280 4726 ntBASIC10.61□□□□□ -0.71
Sox17Q61473 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Sox17Q61473 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox17Q61473 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Sox17Q61473 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.6□□□□□ -0.71
Sox17Q61473 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Sox17Q61473 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.6□□□□□ -0.71
Sox17Q61473 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Sox17Q61473 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Sox17Q61473 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Sox17Q61473 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.6□□□□□ -0.71
Sox17Q61473 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Gm26286-201ENSMUST00000104166 134 ntBASIC10.6□□□□□ -0.71
Sox17Q61473 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.6□□□□□ -0.71
Sox17Q61473 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Gm11793-201ENSMUST00000120433 981 ntBASIC10.6□□□□□ -0.71
Sox17Q61473 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.6□□□□□ -0.71
Sox17Q61473 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.6□□□□□ -0.71
Sox17Q61473 Gm38117-201ENSMUST00000194653 939 ntBASIC10.6□□□□□ -0.71
Sox17Q61473 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.6□□□□□ -0.71
Sox17Q61473 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Gm30285-201ENSMUST00000214614 422 ntBASIC10.6□□□□□ -0.71
Sox17Q61473 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Gm5705-201ENSMUST00000066241 711 ntBASIC10.6□□□□□ -0.71
Sox17Q61473 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Sox17Q61473 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.6□□□□□ -0.71
Sox17Q61473 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Sox17Q61473 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Sox17Q61473 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Nln-205ENSMUST00000224945 2486 ntBASIC10.6□□□□□ -0.71
Sox17Q61473 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox17Q61473 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms