Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.56□□□□□ -0.4
Ift88Q61371 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ift88Q61371 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ift88Q61371 Gm25890-201ENSMUST00000177643 165 ntBASIC12.56□□□□□ -0.4
Ift88Q61371 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.56□□□□□ -0.4
Ift88Q61371 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.56□□□□□ -0.4
Ift88Q61371 Gm22614-201ENSMUST00000178300 165 ntBASIC12.56□□□□□ -0.4
Ift88Q61371 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.56□□□□□ -0.4
Ift88Q61371 Gm43822-201ENSMUST00000200285 476 ntBASIC12.56□□□□□ -0.4
Ift88Q61371 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ift88Q61371 Gm3961-201ENSMUST00000204425 994 ntBASIC12.56□□□□□ -0.4
Ift88Q61371 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.56□□□□□ -0.4
Ift88Q61371 Gm6867-201ENSMUST00000219165 425 ntBASIC12.56□□□□□ -0.4
Ift88Q61371 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.56□□□□□ -0.4
Ift88Q61371 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.56□□□□□ -0.4
Ift88Q61371 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ift88Q61371 Gm22042-201ENSMUST00000082989 165 ntBASIC12.56□□□□□ -0.4
Ift88Q61371 Gm26110-201ENSMUST00000083971 165 ntBASIC12.56□□□□□ -0.4
Ift88Q61371 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ift88Q61371 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ift88Q61371 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.56□□□□□ -0.4
Ift88Q61371 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ift88Q61371 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ift88Q61371 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ift88Q61371 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ift88Q61371 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ift88Q61371 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ift88Q61371 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.56□□□□□ -0.4
Ift88Q61371 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ift88Q61371 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ift88Q61371 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.56□□□□□ -0.4
Ift88Q61371 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.56□□□□□ -0.4
Ift88Q61371 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ift88Q61371 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ift88Q61371 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ift88Q61371 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ift88Q61371 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ift88Q61371 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ift88Q61371 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ift88Q61371 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ift88Q61371 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ift88Q61371 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ift88Q61371 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ift88Q61371 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ift88Q61371 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Ift88Q61371 Gm15711-201ENSMUST00000118889 535 ntBASIC12.55□□□□□ -0.4
Ift88Q61371 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.55□□□□□ -0.4
Ift88Q61371 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.55□□□□□ -0.4
Ift88Q61371 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Ift88Q61371 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ift88Q61371 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.55□□□□□ -0.4
Ift88Q61371 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.55□□□□□ -0.4
Ift88Q61371 Gm9353-201ENSMUST00000200472 604 ntBASIC12.55□□□□□ -0.4
Ift88Q61371 Gm44262-201ENSMUST00000204969 372 ntBASIC12.55□□□□□ -0.4
Ift88Q61371 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
Ift88Q61371 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.55□□□□□ -0.4
Ift88Q61371 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.55□□□□□ -0.4
Ift88Q61371 Gm6722-201ENSMUST00000221586 390 ntBASIC12.55□□□□□ -0.4
Ift88Q61371 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ift88Q61371 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ift88Q61371 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ift88Q61371 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ift88Q61371 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Ift88Q61371 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.55□□□□□ -0.4
Ift88Q61371 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ift88Q61371 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ift88Q61371 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.55□□□□□ -0.4
Ift88Q61371 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ift88Q61371 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ift88Q61371 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.55□□□□□ -0.4
Ift88Q61371 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ift88Q61371 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ift88Q61371 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ift88Q61371 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.54□□□□□ -0.4
Ift88Q61371 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.54□□□□□ -0.4
Ift88Q61371 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.54□□□□□ -0.4
Ift88Q61371 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Gm14723-201ENSMUST00000118686 215 ntBASIC12.54□□□□□ -0.4
Ift88Q61371 Gm12380-201ENSMUST00000119012 544 ntBASIC12.54□□□□□ -0.4
Ift88Q61371 Gm8566-201ENSMUST00000120174 465 ntBASIC12.54□□□□□ -0.4
Ift88Q61371 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.54□□□□□ -0.4
Ift88Q61371 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Gm24749-201ENSMUST00000157838 343 ntBASIC12.54□□□□□ -0.4
Ift88Q61371 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Ift88Q61371 Gm27530-201ENSMUST00000184096 98 ntBASIC12.54□□□□□ -0.4
Ift88Q61371 Gm37259-201ENSMUST00000193903 849 ntBASIC12.54□□□□□ -0.4
Ift88Q61371 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Gm45575-201ENSMUST00000210283 548 ntBASIC12.54□□□□□ -0.4
Ift88Q61371 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms