Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx49Q4FZF3 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx49Q4FZF3 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Ddx49Q4FZF3 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ddx49Q4FZF3 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Ddx49Q4FZF3 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx49Q4FZF3 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ddx49Q4FZF3 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Ddx49Q4FZF3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx49Q4FZF3 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx49Q4FZF3 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx49Q4FZF3 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.31□□□□□ -0.28
Ddx49Q4FZF3 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx49Q4FZF3 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Mir453-201ENSMUST00000104732 82 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm15197-201ENSMUST00000120526 478 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm23400-201ENSMUST00000174994 102 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm26463-201ENSMUST00000175065 101 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm24332-201ENSMUST00000175102 102 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm25959-201ENSMUST00000175112 102 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm22475-201ENSMUST00000175169 102 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm22903-201ENSMUST00000175193 102 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm25070-201ENSMUST00000175237 102 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm24159-201ENSMUST00000175264 102 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm25299-201ENSMUST00000175283 102 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm23798-201ENSMUST00000175560 102 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm23802-201ENSMUST00000175565 102 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm25708-201ENSMUST00000177687 102 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm24370-201ENSMUST00000178007 102 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm23049-201ENSMUST00000178068 102 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm28019-201ENSMUST00000178138 101 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm25571-201ENSMUST00000178322 102 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm25355-201ENSMUST00000178456 101 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm24975-201ENSMUST00000178492 101 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm23189-201ENSMUST00000178954 102 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm25100-201ENSMUST00000179750 101 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm23064-201ENSMUST00000179866 101 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm45085-201ENSMUST00000209100 441 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm6831-202ENSMUST00000213025 1673 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gm10110-202ENSMUST00000228705 3220 ntBASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Ddx49Q4FZF3 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx49Q4FZF3 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx49Q4FZF3 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx49Q4FZF3 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx49Q4FZF3 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx49Q4FZF3 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.29□□□□□ -0.28
Ddx49Q4FZF3 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx49Q4FZF3 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx49Q4FZF3 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms