Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Gm10254-201ENSMUST00000052888 867 ntBASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.1□□□□□ -0.47
Syne3Q4FZC9 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.09□□□□□ -0.47
Syne3Q4FZC9 B9d1os-201ENSMUST00000137010 674 ntBASIC12.09□□□□□ -0.47
Syne3Q4FZC9 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Mir8093-201ENSMUST00000185043 137 ntBASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Gm5982-201ENSMUST00000196234 512 ntBASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.09□□□□□ -0.47
Syne3Q4FZC9 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Gm6867-201ENSMUST00000219165 425 ntBASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Gm18065-201ENSMUST00000221395 526 ntBASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syne3Q4FZC9 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Syne3Q4FZC9 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.08□□□□□ -0.47
Syne3Q4FZC9 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Gm12165-201ENSMUST00000117047 342 ntBASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Gm38151-201ENSMUST00000195085 289 ntBASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Gm18753-201ENSMUST00000201000 566 ntBASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Gm45113-201ENSMUST00000207518 165 ntBASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms