Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Gm8574-201ENSMUST00000203207 924 ntBASIC13.17□□□□□ -0.3
Cdkl5Q3UTQ8 Gm17825-201ENSMUST00000206836 794 ntBASIC13.17□□□□□ -0.3
Cdkl5Q3UTQ8 AC102569.1-201ENSMUST00000221563 685 ntBASIC13.17□□□□□ -0.3
Cdkl5Q3UTQ8 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cdkl5Q3UTQ8 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkl5Q3UTQ8 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkl5Q3UTQ8 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cdkl5Q3UTQ8 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkl5Q3UTQ8 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkl5Q3UTQ8 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkl5Q3UTQ8 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cdkl5Q3UTQ8 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkl5Q3UTQ8 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkl5Q3UTQ8 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Cdkl5Q3UTQ8 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkl5Q3UTQ8 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkl5Q3UTQ8 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.17□□□□□ -0.3
Cdkl5Q3UTQ8 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkl5Q3UTQ8 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Gm13045-201ENSMUST00000119019 712 ntBASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Gm23699-201ENSMUST00000158835 135 ntBASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Gm19353-201ENSMUST00000184561 445 ntBASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Gm37981-201ENSMUST00000194280 535 ntBASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Gm43186-201ENSMUST00000198130 824 ntBASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Mir7686-201ENSMUST00000200604 57 ntBASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Olfr584-201ENSMUST00000098210 964 ntBASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cdkl5Q3UTQ8 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Gm22144-201ENSMUST00000157402 102 ntBASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdkl5Q3UTQ8 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdkl5Q3UTQ8 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdkl5Q3UTQ8 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdkl5Q3UTQ8 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Cdkl5Q3UTQ8 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cdkl5Q3UTQ8 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdkl5Q3UTQ8 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdkl5Q3UTQ8 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdkl5Q3UTQ8 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdkl5Q3UTQ8 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdkl5Q3UTQ8 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms