Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Gm14942-201ENSMUST00000119642 336 ntBASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Gm6485-201ENSMUST00000160676 439 ntBASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Gm9645-201ENSMUST00000197131 792 ntBASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Gm43058-201ENSMUST00000197645 625 ntBASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Gm45770-201ENSMUST00000212105 616 ntBASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Gm18974-201ENSMUST00000221478 1031 ntBASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nhlrc4Q3UP44 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Gm8899-201ENSMUST00000214635 1332 ntBASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Gm19246-201ENSMUST00000173599 255 ntBASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Gm23771-201ENSMUST00000178702 110 ntBASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 AC125486.1-201ENSMUST00000218701 320 ntBASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Gm6430-201ENSMUST00000054664 1248 ntBASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Gm43152-201ENSMUST00000202495 1638 ntBASIC10.42□□□□□ -0.74
Nhlrc4Q3UP44 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms