Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Gm12218-201ENSMUST00000117666 399 ntBASIC12□□□□□ -0.49
Nlrc4Q3UP24 Gm15528-201ENSMUST00000117821 864 ntBASIC12□□□□□ -0.49
Nlrc4Q3UP24 Gm15131-201ENSMUST00000119124 595 ntBASIC12□□□□□ -0.49
Nlrc4Q3UP24 Gm12029-201ENSMUST00000120073 832 ntBASIC12□□□□□ -0.49
Nlrc4Q3UP24 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Gm37826-201ENSMUST00000195329 322 ntBASIC12□□□□□ -0.49
Nlrc4Q3UP24 Gm5542-201ENSMUST00000195485 1089 ntBASIC12□□□□□ -0.49
Nlrc4Q3UP24 Gm9353-201ENSMUST00000200472 604 ntBASIC12□□□□□ -0.49
Nlrc4Q3UP24 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Gm5051-201ENSMUST00000204085 485 ntBASIC12□□□□□ -0.49
Nlrc4Q3UP24 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12□□□□□ -0.49
Nlrc4Q3UP24 AC135469.1-201ENSMUST00000225984 772 ntBASIC12□□□□□ -0.49
Nlrc4Q3UP24 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12□□□□□ -0.49
Nlrc4Q3UP24 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Gm5468-202ENSMUST00000227851 682 ntBASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nlrc4Q3UP24 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nlrc4Q3UP24 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nlrc4Q3UP24 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.98□□□□□ -0.49
Nlrc4Q3UP24 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nlrc4Q3UP24 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms