Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Gm11295-201ENSMUST00000121379 803 ntBASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Gm8163-201ENSMUST00000122020 1060 ntBASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Gm2021-201ENSMUST00000190623 464 ntBASIC10.44□□□□□ -0.74
Spg11Q3UHA3 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Gm42971-201ENSMUST00000199228 2079 ntBASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Hspa12b-202ENSMUST00000100763 628 ntTSL 2 BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Gm16480-201ENSMUST00000120439 832 ntBASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Gm25804-201ENSMUST00000122785 188 ntBASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Gm26532-201ENSMUST00000180630 690 ntBASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Gm29067-201ENSMUST00000190821 470 ntBASIC10.44□□□□□ -0.74
Spg11Q3UHA3 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 AC163038.2-201ENSMUST00000224851 650 ntBASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Gm11437-201ENSMUST00000050771 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Prpf18-204ENSMUST00000152362 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.44□□□□□ -0.74
Spg11Q3UHA3 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Gm13215-201ENSMUST00000117559 472 ntBASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Dnmt3l-ps1-201ENSMUST00000118734 1253 ntBASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Gm45893-201ENSMUST00000211899 247 ntBASIC10.43□□□□□ -0.74
Spg11Q3UHA3 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.43□□□□□ -0.74
Spg11Q3UHA3 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Gm12397-201ENSMUST00000117674 615 ntBASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Gm20281-201ENSMUST00000188225 267 ntBASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms