Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm15416-201ENSMUST00000131080 442 ntTSL 3 BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Tpsab1-202ENSMUST00000153118 1156 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Gm23094-201ENSMUST00000157551 322 ntBASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Rsl24d1-203ENSMUST00000165177 597 ntTSL 3 BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Olfr925-ps1-201ENSMUST00000217295 780 ntBASIC5.79□□□□□ -1.48
Ush2AQ2QI47 CT030657.4-201ENSMUST00000222177 744 ntBASIC5.79□□□□□ -1.48
Ush2AQ2QI47 AC165260.5-201ENSMUST00000224640 1247 ntBASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Cnfn-201ENSMUST00000076276 524 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Tmem41b-203ENSMUST00000119929 2346 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Gm12950-201ENSMUST00000121683 417 ntBASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Rpl19-ps11-201ENSMUST00000122422 591 ntBASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Pitpnm2os2-202ENSMUST00000162577 744 ntTSL 3 BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Rit1-207ENSMUST00000172252 820 ntTSL 3 BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Gm40414-201ENSMUST00000197608 481 ntBASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Gm18646-201ENSMUST00000212240 1063 ntBASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Gm19045-201ENSMUST00000222488 1193 ntBASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Gm4257-201ENSMUST00000222877 513 ntBASIC5.79□□□□□ -1.48
Ush2AQ2QI47 4930428N03Rik-205ENSMUST00000225654 892 ntBASIC5.79□□□□□ -1.48
Ush2AQ2QI47 1700013G24Rik-201ENSMUST00000048893 1048 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Folr2-201ENSMUST00000094141 1067 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Mipol1-205ENSMUST00000145003 1424 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Taar7c-ps-201ENSMUST00000122123 1055 ntBASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm14250-201ENSMUST00000148458 566 ntTSL 3 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Plut-201ENSMUST00000172461 855 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm38313-201ENSMUST00000191953 1266 ntBASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm37860-201ENSMUST00000195380 1034 ntBASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 AC122024.3-201ENSMUST00000217719 294 ntBASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Apoc3-201ENSMUST00000034586 526 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Crip1-201ENSMUST00000006523 445 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm26205-201ENSMUST00000082907 134 ntBASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm23037-201ENSMUST00000083874 324 ntBASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm43174-201ENSMUST00000195914 2445 ntBASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm5342-201ENSMUST00000181982 1003 ntBASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm23604-202ENSMUST00000198428 137 ntBASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm39662-201ENSMUST00000211909 1227 ntTSL 5 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm21115-201ENSMUST00000187565 2578 ntBASIC5.78□□□□□ -1.48
Ush2AQ2QI47 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 9530026F06Rik-201ENSMUST00000141000 892 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm6723-201ENSMUST00000180449 441 ntBASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm20587-201ENSMUST00000186367 1186 ntBASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm38314-201ENSMUST00000195709 625 ntBASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm42952-203ENSMUST00000197784 798 ntTSL 3 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm23786-202ENSMUST00000200181 119 ntBASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Tmem29-212ENSMUST00000173996 1433 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Ighv1-82-201ENSMUST00000103549 294 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 287.5 ms