Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Gm11930-201ENSMUST00000117788 190 ntBASIC9.72□□□□□ -0.85
Smn1P97801 Gm14109-201ENSMUST00000118814 309 ntBASIC9.72□□□□□ -0.85
Smn1P97801 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC9.72□□□□□ -0.85
Smn1P97801 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC9.72□□□□□ -0.85
Smn1P97801 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Smn1P97801 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC9.72□□□□□ -0.85
Smn1P97801 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Uba52-ps-201ENSMUST00000183770 379 ntBASIC9.72□□□□□ -0.85
Smn1P97801 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
Smn1P97801 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC9.72□□□□□ -0.85
Smn1P97801 Gm18935-201ENSMUST00000212692 664 ntBASIC9.72□□□□□ -0.85
Smn1P97801 Olfr1347-205ENSMUST00000220413 964 ntBASIC9.72□□□□□ -0.85
Smn1P97801 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Smn1P97801 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Smn1P97801 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Smn1P97801 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Smn1P97801 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC9.72□□□□□ -0.85
Smn1P97801 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.72□□□□□ -0.85
Smn1P97801 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Smn1P97801 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Gm45199-201ENSMUST00000207640 1507 ntBASIC9.72□□□□□ -0.85
Smn1P97801 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smn1P97801 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.71□□□□□ -0.85
Smn1P97801 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smn1P97801 Gm42427-201ENSMUST00000200473 5292 ntBASIC9.71□□□□□ -0.85
Smn1P97801 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smn1P97801 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Smn1P97801 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smn1P97801 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smn1P97801 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC9.71□□□□□ -0.85
Smn1P97801 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Smn1P97801 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Smn1P97801 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Smn1P97801 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smn1P97801 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Smn1P97801 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Smn1P97801 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Smn1P97801 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Smn1P97801 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Smn1P97801 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Smn1P97801 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC9.71□□□□□ -0.86
Smn1P97801 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Smn1P97801 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC9.71□□□□□ -0.86
Smn1P97801 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC9.71□□□□□ -0.86
Smn1P97801 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Smn1P97801 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Smn1P97801 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Smn1P97801 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Smn1P97801 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Smn1P97801 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC9.71□□□□□ -0.86
Smn1P97801 Gm4310-201ENSMUST00000177847 889 ntBASIC9.71□□□□□ -0.86
Smn1P97801 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC9.71□□□□□ -0.86
Smn1P97801 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC9.71□□□□□ -0.86
Smn1P97801 Gm21156-201ENSMUST00000189693 869 ntBASIC9.71□□□□□ -0.86
Smn1P97801 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC9.71□□□□□ -0.86
Smn1P97801 Gm37424-201ENSMUST00000191727 561 ntBASIC9.71□□□□□ -0.86
Smn1P97801 Gm32999-201ENSMUST00000192693 562 ntBASIC9.71□□□□□ -0.86
Smn1P97801 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC9.71□□□□□ -0.86
Smn1P97801 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC9.71□□□□□ -0.86
Smn1P97801 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smn1P97801 Gm18054-201ENSMUST00000207539 555 ntBASIC9.71□□□□□ -0.86
Smn1P97801 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC9.71□□□□□ -0.86
Smn1P97801 Gm7293-201ENSMUST00000216682 1007 ntBASIC9.71□□□□□ -0.86
Smn1P97801 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC9.71□□□□□ -0.86
Smn1P97801 CT025533.2-201ENSMUST00000228715 1248 ntBASIC9.71□□□□□ -0.86
Smn1P97801 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smn1P97801 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.86
Smn1P97801 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smn1P97801 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Smn1P97801 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smn1P97801 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Smn1P97801 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC9.71□□□□□ -0.86
Smn1P97801 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smn1P97801 Gm19327-201ENSMUST00000220651 3271 ntBASIC9.71□□□□□ -0.86
Smn1P97801 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Smn1P97801 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms